Hb_008699_030

Information

Type -
Description -
Location Contig8699: 39361-40293
Sequence    

Annotation

kegg
ID cit:102607343
description probable purine permease 5-like
nr
ID KDO59449.1
description hypothetical protein CISIN_1g017963mg [Citrus sinensis]
swissprot
ID Q9ZUH3
description Probable purine permease 5 OS=Arabidopsis thaliana GN=PUP5 PE=2 SV=2
trembl
ID A0A067EWB7
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017963mg PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable purine permease 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008699_030 0.0 - - hypothetical protein CISIN_1g017963mg [Citrus sinensis]
2 Hb_015675_030 0.1198921254 - - PREDICTED: UMP-CMP kinase 3 isoform X2 [Jatropha curcas]
3 Hb_000240_030 0.1278924279 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001195_070 0.1316922941 - - PREDICTED: protein RER1B-like [Jatropha curcas]
5 Hb_003207_020 0.1427878972 - - PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Jatropha curcas]
6 Hb_000946_110 0.1519849448 - - GTP cyclohydrolase I, putative [Ricinus communis]
7 Hb_001124_100 0.1536398601 - - PREDICTED: vesicle-associated protein 2-2-like isoform X1 [Jatropha curcas]
8 Hb_002955_020 0.1538105987 - - PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]
9 Hb_010883_190 0.1544040483 - - conserved hypothetical protein [Ricinus communis]
10 Hb_006154_020 0.1552447134 transcription factor TF Family: C2H2 hypothetical protein RCOM_1621120 [Ricinus communis]
11 Hb_001486_040 0.1558742099 - - PREDICTED: uncharacterized protein LOC105632624 isoform X1 [Jatropha curcas]
12 Hb_020805_140 0.1594629125 - - PREDICTED: F-box/kelch-repeat protein At5g42360-like [Jatropha curcas]
13 Hb_113818_010 0.1594641671 - - Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis]
14 Hb_003103_010 0.1606549314 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002325_070 0.160681301 - - ATP binding protein, putative [Ricinus communis]
16 Hb_025466_020 0.1612451527 - - tubulin beta-6 [Brassica oleracea var. italica]
17 Hb_027073_010 0.1630937972 - - PREDICTED: protein CHROMOSOME TRANSMISSION FIDELITY 7 [Jatropha curcas]
18 Hb_003453_050 0.1640958138 - - PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-3-like [Jatropha curcas]
19 Hb_000590_120 0.1644184452 - - dehydroascorbate reductase, putative [Ricinus communis]
20 Hb_000671_130 0.1648709224 - - PREDICTED: CMP-sialic acid transporter 2 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_008699_030 Hb_008699_030 Hb_015675_030 Hb_015675_030 Hb_008699_030--Hb_015675_030 Hb_000240_030 Hb_000240_030 Hb_008699_030--Hb_000240_030 Hb_001195_070 Hb_001195_070 Hb_008699_030--Hb_001195_070 Hb_003207_020 Hb_003207_020 Hb_008699_030--Hb_003207_020 Hb_000946_110 Hb_000946_110 Hb_008699_030--Hb_000946_110 Hb_001124_100 Hb_001124_100 Hb_008699_030--Hb_001124_100 Hb_001142_010 Hb_001142_010 Hb_015675_030--Hb_001142_010 Hb_015675_030--Hb_000240_030 Hb_015675_030--Hb_001195_070 Hb_003453_050 Hb_003453_050 Hb_015675_030--Hb_003453_050 Hb_000381_010 Hb_000381_010 Hb_015675_030--Hb_000381_010 Hb_000590_120 Hb_000590_120 Hb_000240_030--Hb_000590_120 Hb_066842_010 Hb_066842_010 Hb_000240_030--Hb_066842_010 Hb_006683_070 Hb_006683_070 Hb_000240_030--Hb_006683_070 Hb_011249_020 Hb_011249_020 Hb_000240_030--Hb_011249_020 Hb_002392_010 Hb_002392_010 Hb_000240_030--Hb_002392_010 Hb_002110_100 Hb_002110_100 Hb_000240_030--Hb_002110_100 Hb_000175_260 Hb_000175_260 Hb_001195_070--Hb_000175_260 Hb_001584_240 Hb_001584_240 Hb_001195_070--Hb_001584_240 Hb_003103_010 Hb_003103_010 Hb_001195_070--Hb_003103_010 Hb_000671_130 Hb_000671_130 Hb_001195_070--Hb_000671_130 Hb_033152_070 Hb_033152_070 Hb_003207_020--Hb_033152_070 Hb_001486_040 Hb_001486_040 Hb_003207_020--Hb_001486_040 Hb_010042_020 Hb_010042_020 Hb_003207_020--Hb_010042_020 Hb_003994_030 Hb_003994_030 Hb_003207_020--Hb_003994_030 Hb_000402_130 Hb_000402_130 Hb_003207_020--Hb_000402_130 Hb_005701_120 Hb_005701_120 Hb_003207_020--Hb_005701_120 Hb_000297_120 Hb_000297_120 Hb_000946_110--Hb_000297_120 Hb_004046_030 Hb_004046_030 Hb_000946_110--Hb_004046_030 Hb_002804_040 Hb_002804_040 Hb_000946_110--Hb_002804_040 Hb_002043_040 Hb_002043_040 Hb_000946_110--Hb_002043_040 Hb_000309_050 Hb_000309_050 Hb_000946_110--Hb_000309_050 Hb_006277_010 Hb_006277_010 Hb_000946_110--Hb_006277_010 Hb_006154_020 Hb_006154_020 Hb_001124_100--Hb_006154_020 Hb_113818_010 Hb_113818_010 Hb_001124_100--Hb_113818_010 Hb_000310_100 Hb_000310_100 Hb_001124_100--Hb_000310_100 Hb_027073_010 Hb_027073_010 Hb_001124_100--Hb_027073_010 Hb_001124_100--Hb_002804_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.00999 5.77306 9.78796 55.4973 2.48504 7.25299
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.0006 12.8707 13.7797 11.176 42.3865

CAGE analysis