Hb_008173_150

Information

Type -
Description -
Location Contig8173: 88794-89930
Sequence    

Annotation

kegg
ID rcu:RCOM_1686660
description 2-deoxyglucose-6-phosphate phosphatase, putative
nr
ID XP_012086909.1
description PREDICTED: uncharacterized protein LOC105645812 [Jatropha curcas]
swissprot
ID P44004
description Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0488 PE=3 SV=1
trembl
ID A0A067JZK1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20596 PE=4 SV=1
Gene Ontology
ID GO:0016787
description haloacid dehalogenase-like hydrolase superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59473: 88199-88463
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008173_150 0.0 - - PREDICTED: uncharacterized protein LOC105645812 [Jatropha curcas]
2 Hb_001638_330 0.1002591473 transcription factor TF Family: Pseudo ARR-B PREDICTED: two-component response regulator-like APRR3 isoform X1 [Jatropha curcas]
3 Hb_002435_100 0.1121516228 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Jatropha curcas]
4 Hb_000673_010 0.1135241971 - - PREDICTED: uncharacterized protein LOC105636554 isoform X1 [Jatropha curcas]
5 Hb_001160_100 0.1231721324 - - PREDICTED: probable plastid-lipid-associated protein 6, chloroplastic [Jatropha curcas]
6 Hb_026048_110 0.1242168557 - - PREDICTED: uncharacterized protein LOC105645733 [Jatropha curcas]
7 Hb_001409_060 0.1254037131 transcription factor TF Family: TRAF Regulatory protein NPR1, putative [Ricinus communis]
8 Hb_006275_020 0.1274567279 - - PREDICTED: VIN3-like protein 2 [Jatropha curcas]
9 Hb_000256_090 0.1280443891 - - PREDICTED: uncharacterized protein LOC105637579 [Jatropha curcas]
10 Hb_000107_340 0.1285497514 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105637652 [Jatropha curcas]
11 Hb_009288_010 0.1303317706 desease resistance Gene Name: Clp_N ERD1 protein, chloroplast precursor, putative [Ricinus communis]
12 Hb_102948_010 0.1329260271 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
13 Hb_000137_010 0.1337897095 - - PREDICTED: uncharacterized protein LOC105644349 [Jatropha curcas]
14 Hb_005725_030 0.1343017179 - - PREDICTED: U-box domain-containing protein 27-like [Beta vulgaris subsp. vulgaris]
15 Hb_000304_080 0.1351067757 - - PREDICTED: probable helicase MAGATAMA 3 isoform X1 [Jatropha curcas]
16 Hb_002157_080 0.1353368283 - - PREDICTED: uncharacterized protein LOC105628780 isoform X2 [Jatropha curcas]
17 Hb_022378_010 0.1357092051 - - PREDICTED: uncharacterized protein LOC105634715 isoform X1 [Jatropha curcas]
18 Hb_002259_170 0.1376057283 - - PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial-like [Jatropha curcas]
19 Hb_004223_030 0.1400510476 - - PREDICTED: uncharacterized protein LOC105635347 isoform X1 [Jatropha curcas]
20 Hb_000035_090 0.1402123665 - - PREDICTED: stromal cell-derived factor 2-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_008173_150 Hb_008173_150 Hb_001638_330 Hb_001638_330 Hb_008173_150--Hb_001638_330 Hb_002435_100 Hb_002435_100 Hb_008173_150--Hb_002435_100 Hb_000673_010 Hb_000673_010 Hb_008173_150--Hb_000673_010 Hb_001160_100 Hb_001160_100 Hb_008173_150--Hb_001160_100 Hb_026048_110 Hb_026048_110 Hb_008173_150--Hb_026048_110 Hb_001409_060 Hb_001409_060 Hb_008173_150--Hb_001409_060 Hb_001638_330--Hb_000673_010 Hb_102948_010 Hb_102948_010 Hb_001638_330--Hb_102948_010 Hb_001430_020 Hb_001430_020 Hb_001638_330--Hb_001430_020 Hb_003408_060 Hb_003408_060 Hb_001638_330--Hb_003408_060 Hb_000555_020 Hb_000555_020 Hb_001638_330--Hb_000555_020 Hb_007254_020 Hb_007254_020 Hb_002435_100--Hb_007254_020 Hb_000292_100 Hb_000292_100 Hb_002435_100--Hb_000292_100 Hb_000230_460 Hb_000230_460 Hb_002435_100--Hb_000230_460 Hb_000035_090 Hb_000035_090 Hb_002435_100--Hb_000035_090 Hb_000230_400 Hb_000230_400 Hb_002435_100--Hb_000230_400 Hb_000282_090 Hb_000282_090 Hb_002435_100--Hb_000282_090 Hb_001766_070 Hb_001766_070 Hb_000673_010--Hb_001766_070 Hb_008120_040 Hb_008120_040 Hb_000673_010--Hb_008120_040 Hb_005235_070 Hb_005235_070 Hb_000673_010--Hb_005235_070 Hb_000137_010 Hb_000137_010 Hb_000673_010--Hb_000137_010 Hb_000603_190 Hb_000603_190 Hb_000673_010--Hb_000603_190 Hb_000673_010--Hb_001409_060 Hb_001675_140 Hb_001675_140 Hb_001160_100--Hb_001675_140 Hb_009847_030 Hb_009847_030 Hb_001160_100--Hb_009847_030 Hb_005511_140 Hb_005511_140 Hb_001160_100--Hb_005511_140 Hb_001511_090 Hb_001511_090 Hb_001160_100--Hb_001511_090 Hb_002259_170 Hb_002259_170 Hb_001160_100--Hb_002259_170 Hb_001160_100--Hb_005235_070 Hb_000256_090 Hb_000256_090 Hb_026048_110--Hb_000256_090 Hb_001717_010 Hb_001717_010 Hb_026048_110--Hb_001717_010 Hb_005162_090 Hb_005162_090 Hb_026048_110--Hb_005162_090 Hb_010872_070 Hb_010872_070 Hb_026048_110--Hb_010872_070 Hb_005563_070 Hb_005563_070 Hb_026048_110--Hb_005563_070 Hb_006275_020 Hb_006275_020 Hb_026048_110--Hb_006275_020 Hb_001409_060--Hb_102948_010 Hb_001409_060--Hb_001766_070 Hb_002218_020 Hb_002218_020 Hb_001409_060--Hb_002218_020 Hb_000663_080 Hb_000663_080 Hb_001409_060--Hb_000663_080 Hb_001409_060--Hb_001430_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.3847 19.0518 16.2123 8.13212 5.70433 5.66275
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.96965 9.19378 9.03228 2.84018 15.4551

CAGE analysis