Hb_007773_030

Information

Type -
Description -
Location Contig7773: 42767-43495
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007773_030 0.0 - - -
2 Hb_007441_060 0.1523562282 - - -
3 Hb_010578_050 0.1651469809 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
4 Hb_133636_010 0.1733290224 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
5 Hb_000035_300 0.1803208235 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002783_320 0.1833951008 transcription factor TF Family: E2F-DP PREDICTED: transcription factor E2FC isoform X1 [Jatropha curcas]
7 Hb_001584_010 0.1894335132 - - kelch repeat protein, putative [Ricinus communis]
8 Hb_000676_030 0.1922995177 - - PREDICTED: probable mitochondrial chaperone BCS1-B [Jatropha curcas]
9 Hb_005186_090 0.2010935532 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_004286_030 0.2055881197 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor ANT [Jatropha curcas]
11 Hb_000625_060 0.2060513696 - - Protein P21, putative [Ricinus communis]
12 Hb_001481_030 0.2061064518 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_000030_260 0.2079979532 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
14 Hb_001424_080 0.2127488129 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
15 Hb_011861_110 0.2132311665 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
16 Hb_000893_050 0.2144949521 - - structural constituent of cell wall, putative [Ricinus communis]
17 Hb_000720_110 0.2162758559 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
18 Hb_005157_010 0.2167288389 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
19 Hb_006615_040 0.2174186143 - - monoxygenase, putative [Ricinus communis]
20 Hb_034342_010 0.2200740156 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007773_030 Hb_007773_030 Hb_007441_060 Hb_007441_060 Hb_007773_030--Hb_007441_060 Hb_010578_050 Hb_010578_050 Hb_007773_030--Hb_010578_050 Hb_133636_010 Hb_133636_010 Hb_007773_030--Hb_133636_010 Hb_000035_300 Hb_000035_300 Hb_007773_030--Hb_000035_300 Hb_002783_320 Hb_002783_320 Hb_007773_030--Hb_002783_320 Hb_001584_010 Hb_001584_010 Hb_007773_030--Hb_001584_010 Hb_007885_080 Hb_007885_080 Hb_007441_060--Hb_007885_080 Hb_000270_850 Hb_000270_850 Hb_007441_060--Hb_000270_850 Hb_007441_060--Hb_133636_010 Hb_001377_500 Hb_001377_500 Hb_007441_060--Hb_001377_500 Hb_000676_030 Hb_000676_030 Hb_007441_060--Hb_000676_030 Hb_005186_090 Hb_005186_090 Hb_010578_050--Hb_005186_090 Hb_010578_050--Hb_002783_320 Hb_000625_060 Hb_000625_060 Hb_010578_050--Hb_000625_060 Hb_000030_260 Hb_000030_260 Hb_010578_050--Hb_000030_260 Hb_000836_390 Hb_000836_390 Hb_010578_050--Hb_000836_390 Hb_000120_070 Hb_000120_070 Hb_010578_050--Hb_000120_070 Hb_003299_010 Hb_003299_010 Hb_133636_010--Hb_003299_010 Hb_000844_010 Hb_000844_010 Hb_133636_010--Hb_000844_010 Hb_133636_010--Hb_002783_320 Hb_005157_010 Hb_005157_010 Hb_133636_010--Hb_005157_010 Hb_011909_030 Hb_011909_030 Hb_133636_010--Hb_011909_030 Hb_000512_080 Hb_000512_080 Hb_000035_300--Hb_000512_080 Hb_015912_010 Hb_015912_010 Hb_000035_300--Hb_015912_010 Hb_000291_020 Hb_000291_020 Hb_000035_300--Hb_000291_020 Hb_001481_030 Hb_001481_030 Hb_000035_300--Hb_001481_030 Hb_002787_100 Hb_002787_100 Hb_000035_300--Hb_002787_100 Hb_005306_040 Hb_005306_040 Hb_000035_300--Hb_005306_040 Hb_002783_320--Hb_000030_260 Hb_002783_320--Hb_000676_030 Hb_017866_020 Hb_017866_020 Hb_002783_320--Hb_017866_020 Hb_011970_040 Hb_011970_040 Hb_002783_320--Hb_011970_040 Hb_004195_170 Hb_004195_170 Hb_002783_320--Hb_004195_170 Hb_000189_120 Hb_000189_120 Hb_001584_010--Hb_000189_120 Hb_008175_030 Hb_008175_030 Hb_001584_010--Hb_008175_030 Hb_001584_010--Hb_003299_010 Hb_000778_020 Hb_000778_020 Hb_001584_010--Hb_000778_020 Hb_000007_160 Hb_000007_160 Hb_001584_010--Hb_000007_160 Hb_003525_020 Hb_003525_020 Hb_001584_010--Hb_003525_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.123519 1.61204 0.438573 0.237803 0.0509894 0.0958308
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.07269 0

CAGE analysis