Hb_008175_030

Information

Type transcription factor
Description TF Family: TAZ
Location Contig8175: 41827-46216
Sequence    

Annotation

kegg
ID rcu:RCOM_0151040
description protein binding protein, putative
nr
ID XP_012075384.1
description PREDICTED: BTB/POZ and TAZ domain-containing protein 3 [Jatropha curcas]
swissprot
ID Q9SYL0
description BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana GN=BT3 PE=1 SV=2
trembl
ID A0A067KJE5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10667 PE=4 SV=1
Gene Ontology
ID GO:0003712
description btb poz and taz domain-containing protein 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59476: 41382-46213 , PASA_asmbl_59477: 41338-41699 , PASA_asmbl_59478: 41457-41775 , PASA_asmbl_59479: 42426-42634
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008175_030 0.0 transcription factor TF Family: TAZ PREDICTED: BTB/POZ and TAZ domain-containing protein 3 [Jatropha curcas]
2 Hb_000778_020 0.0696836156 - - PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
3 Hb_002739_060 0.0895330748 - - -
4 Hb_005880_010 0.1112871976 - - PREDICTED: uncharacterized protein LOC105646431 [Jatropha curcas]
5 Hb_001408_150 0.1135754956 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
6 Hb_057079_020 0.1189927652 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000532_130 0.1212071362 - - hypothetical protein [Anabaena sp. PCC 7108]
8 Hb_000007_160 0.1276282832 - - hypothetical protein POPTR_0008s10970g [Populus trichocarpa]
9 Hb_002218_070 0.1279616835 - - PREDICTED: myosin-binding protein 1 [Jatropha curcas]
10 Hb_000189_120 0.1294305961 transcription factor TF Family: bHLH PREDICTED: transcription factor UNE12-like isoform X5 [Jatropha curcas]
11 Hb_007253_040 0.1350532928 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-10 isoform X1 [Jatropha curcas]
12 Hb_007618_010 0.1359421913 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
13 Hb_001410_010 0.1375287566 transcription factor TF Family: RWP-RK PREDICTED: protein NLP7-like [Jatropha curcas]
14 Hb_004218_160 0.1376990634 - - NBS-LRR type disease resistance protein [Medicago truncatula]
15 Hb_001921_010 0.1381123296 - - ATP-dependent RNA helicase, putative [Ricinus communis]
16 Hb_002928_180 0.1391970167 - - catalase CAT1 [Manihot esculenta]
17 Hb_002660_040 0.1411663738 - - PREDICTED: CASP-like protein 5A1 isoform X1 [Jatropha curcas]
18 Hb_060909_010 0.1425764492 - - PREDICTED: uncharacterized protein LOC100246093 [Vitis vinifera]
19 Hb_001584_010 0.1430757573 - - kelch repeat protein, putative [Ricinus communis]
20 Hb_001369_160 0.1434371502 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]

Gene co-expression network

sample Hb_008175_030 Hb_008175_030 Hb_000778_020 Hb_000778_020 Hb_008175_030--Hb_000778_020 Hb_002739_060 Hb_002739_060 Hb_008175_030--Hb_002739_060 Hb_005880_010 Hb_005880_010 Hb_008175_030--Hb_005880_010 Hb_001408_150 Hb_001408_150 Hb_008175_030--Hb_001408_150 Hb_057079_020 Hb_057079_020 Hb_008175_030--Hb_057079_020 Hb_000532_130 Hb_000532_130 Hb_008175_030--Hb_000532_130 Hb_000778_020--Hb_057079_020 Hb_002928_180 Hb_002928_180 Hb_000778_020--Hb_002928_180 Hb_010253_020 Hb_010253_020 Hb_000778_020--Hb_010253_020 Hb_000778_020--Hb_001408_150 Hb_000189_120 Hb_000189_120 Hb_000778_020--Hb_000189_120 Hb_002739_060--Hb_000532_130 Hb_002739_060--Hb_000778_020 Hb_002739_060--Hb_001408_150 Hb_002739_060--Hb_005880_010 Hb_002609_150 Hb_002609_150 Hb_002739_060--Hb_002609_150 Hb_002833_020 Hb_002833_020 Hb_005880_010--Hb_002833_020 Hb_002660_040 Hb_002660_040 Hb_005880_010--Hb_002660_040 Hb_005880_010--Hb_000778_020 Hb_000261_320 Hb_000261_320 Hb_005880_010--Hb_000261_320 Hb_001369_160 Hb_001369_160 Hb_005880_010--Hb_001369_160 Hb_060909_010 Hb_060909_010 Hb_001408_150--Hb_060909_010 Hb_001408_150--Hb_000532_130 Hb_000197_230 Hb_000197_230 Hb_001408_150--Hb_000197_230 Hb_001410_010 Hb_001410_010 Hb_057079_020--Hb_001410_010 Hb_013749_060 Hb_013749_060 Hb_057079_020--Hb_013749_060 Hb_011310_200 Hb_011310_200 Hb_057079_020--Hb_011310_200 Hb_057079_020--Hb_010253_020 Hb_007253_040 Hb_007253_040 Hb_000532_130--Hb_007253_040 Hb_000532_130--Hb_002609_150 Hb_000532_130--Hb_060909_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.3786 83.6975 16.4646 25.9881 5.75358 7.88518
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.26324 1.14684 1.15773 54.9245 17.6168

CAGE analysis