Hb_007423_030

Information

Type -
Description -
Location Contig7423: 34754-35635
Sequence    

Annotation

kegg
ID pop:POPTR_0001s31910g
description POPTRDRAFT_549850; phosphate-responsive family protein
nr
ID XP_012069149.1
description PREDICTED: protein EXORDIUM-like 2 [Jatropha curcas]
swissprot
ID Q9FE06
description Protein EXORDIUM-like 2 OS=Arabidopsis thaliana GN=EXL2 PE=2 SV=1
trembl
ID A0A067L8T9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24914 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 006_P13.ab1: 34707-35447

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007423_030 0.0 - - PREDICTED: protein EXORDIUM-like 2 [Jatropha curcas]
2 Hb_001565_020 0.1570825627 - - PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial, partial [Jatropha curcas]
3 Hb_006745_010 0.1693328302 - - PREDICTED: uncharacterized protein LOC105640095 [Jatropha curcas]
4 Hb_003001_040 0.1702840705 - - Glycosyltransferase QUASIMODO1, putative [Ricinus communis]
5 Hb_128695_030 0.1703778299 - - heat shock protein, putative [Ricinus communis]
6 Hb_002774_150 0.1763072382 - - PREDICTED: F-box protein At1g22220 [Jatropha curcas]
7 Hb_004648_070 0.1777599026 - - ubiquitin-protein ligase, putative [Ricinus communis]
8 Hb_000139_180 0.1789871629 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Jatropha curcas]
9 Hb_178127_010 0.1799590439 - - Ubiquitin ligase SINAT3, putative [Ricinus communis]
10 Hb_004970_180 0.1825880242 - - -
11 Hb_000056_300 0.1851530159 - - PREDICTED: probable methyltransferase PMT2 isoform X2 [Jatropha curcas]
12 Hb_005568_130 0.1859366856 transcription factor TF Family: C2C2-Dof zinc finger protein, putative [Ricinus communis]
13 Hb_097646_010 0.1862998993 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Populus euphratica]
14 Hb_003018_040 0.1894475557 transcription factor TF Family: C3H conserved hypothetical protein [Ricinus communis]
15 Hb_012038_010 0.1899344013 - - phospholipid-transporting atpase, putative [Ricinus communis]
16 Hb_006054_030 0.192501432 - - PREDICTED: protein GPR107-like [Jatropha curcas]
17 Hb_000117_060 0.1945894374 - - PREDICTED: uncharacterized protein LOC103949199 [Pyrus x bretschneideri]
18 Hb_001514_060 0.1984856115 transcription factor TF Family: MYB hypothetical protein JCGZ_16088 [Jatropha curcas]
19 Hb_001565_060 0.2001625144 - - PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial [Jatropha curcas]
20 Hb_021576_140 0.2020978157 - - PREDICTED: protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like [Jatropha curcas]

Gene co-expression network

sample Hb_007423_030 Hb_007423_030 Hb_001565_020 Hb_001565_020 Hb_007423_030--Hb_001565_020 Hb_006745_010 Hb_006745_010 Hb_007423_030--Hb_006745_010 Hb_003001_040 Hb_003001_040 Hb_007423_030--Hb_003001_040 Hb_128695_030 Hb_128695_030 Hb_007423_030--Hb_128695_030 Hb_002774_150 Hb_002774_150 Hb_007423_030--Hb_002774_150 Hb_004648_070 Hb_004648_070 Hb_007423_030--Hb_004648_070 Hb_178127_010 Hb_178127_010 Hb_001565_020--Hb_178127_010 Hb_001565_020--Hb_128695_030 Hb_001454_220 Hb_001454_220 Hb_001565_020--Hb_001454_220 Hb_000422_110 Hb_000422_110 Hb_001565_020--Hb_000422_110 Hb_001565_060 Hb_001565_060 Hb_001565_020--Hb_001565_060 Hb_153161_010 Hb_153161_010 Hb_001565_020--Hb_153161_010 Hb_030827_060 Hb_030827_060 Hb_006745_010--Hb_030827_060 Hb_006745_010--Hb_000422_110 Hb_001307_010 Hb_001307_010 Hb_006745_010--Hb_001307_010 Hb_006745_010--Hb_004648_070 Hb_000979_240 Hb_000979_240 Hb_006745_010--Hb_000979_240 Hb_002999_060 Hb_002999_060 Hb_006745_010--Hb_002999_060 Hb_020805_100 Hb_020805_100 Hb_003001_040--Hb_020805_100 Hb_024698_010 Hb_024698_010 Hb_003001_040--Hb_024698_010 Hb_000334_130 Hb_000334_130 Hb_003001_040--Hb_000334_130 Hb_097646_010 Hb_097646_010 Hb_003001_040--Hb_097646_010 Hb_003001_040--Hb_000979_240 Hb_000358_200 Hb_000358_200 Hb_003001_040--Hb_000358_200 Hb_000056_300 Hb_000056_300 Hb_128695_030--Hb_000056_300 Hb_128695_030--Hb_178127_010 Hb_002942_110 Hb_002942_110 Hb_128695_030--Hb_002942_110 Hb_005054_310 Hb_005054_310 Hb_128695_030--Hb_005054_310 Hb_000836_370 Hb_000836_370 Hb_128695_030--Hb_000836_370 Hb_004324_060 Hb_004324_060 Hb_002774_150--Hb_004324_060 Hb_002485_040 Hb_002485_040 Hb_002774_150--Hb_002485_040 Hb_012038_010 Hb_012038_010 Hb_002774_150--Hb_012038_010 Hb_172421_010 Hb_172421_010 Hb_002774_150--Hb_172421_010 Hb_004994_300 Hb_004994_300 Hb_002774_150--Hb_004994_300 Hb_012753_040 Hb_012753_040 Hb_002774_150--Hb_012753_040 Hb_001514_060 Hb_001514_060 Hb_004648_070--Hb_001514_060 Hb_004648_070--Hb_012038_010 Hb_002387_070 Hb_002387_070 Hb_004648_070--Hb_002387_070 Hb_000139_180 Hb_000139_180 Hb_004648_070--Hb_000139_180 Hb_000015_160 Hb_000015_160 Hb_004648_070--Hb_000015_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
100.821 400.642 109.386 179.93 167.747 55.5368
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.33669 5.79292 59.7339 26.7675 71.4471

CAGE analysis