Hb_006745_010

Information

Type -
Description -
Location Contig6745: 30158-30598
Sequence    

Annotation

kegg
ID cic:CICLE_v10012648mg
description hypothetical protein
nr
ID XP_012079712.1
description PREDICTED: uncharacterized protein LOC105640095 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LBR9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17439 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006745_010 0.0 - - PREDICTED: uncharacterized protein LOC105640095 [Jatropha curcas]
2 Hb_030827_060 0.1288998347 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-2b [Jatropha curcas]
3 Hb_000422_110 0.1391166234 - - PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
4 Hb_001307_010 0.1536225414 - - PREDICTED: uncharacterized protein LOC103939917 [Pyrus x bretschneideri]
5 Hb_004648_070 0.1536870851 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_000979_240 0.1547800232 transcription factor TF Family: GRAS PREDICTED: DELLA protein GAIP-B [Jatropha curcas]
7 Hb_002999_060 0.1585802726 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
8 Hb_178127_010 0.1601008098 - - Ubiquitin ligase SINAT3, putative [Ricinus communis]
9 Hb_011164_010 0.1619981418 - - cytosolic class II low molecular weight heat shock protein [Prunus dulcis]
10 Hb_012038_010 0.1656948013 - - phospholipid-transporting atpase, putative [Ricinus communis]
11 Hb_104265_030 0.1661863069 - - hypothetical protein POPTR_0001s31230g [Populus trichocarpa]
12 Hb_003018_040 0.1675759549 transcription factor TF Family: C3H conserved hypothetical protein [Ricinus communis]
13 Hb_007423_030 0.1693328302 - - PREDICTED: protein EXORDIUM-like 2 [Jatropha curcas]
14 Hb_013749_020 0.1702117788 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
15 Hb_006420_020 0.1718681434 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
16 Hb_000152_640 0.1721494553 - - PREDICTED: monocopper oxidase-like protein SKS1 [Jatropha curcas]
17 Hb_001565_020 0.1737038917 - - PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial, partial [Jatropha curcas]
18 Hb_021576_140 0.1762635258 - - PREDICTED: protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like [Jatropha curcas]
19 Hb_000571_150 0.1800746907 transcription factor TF Family: GRAS transcription factor, putative [Ricinus communis]
20 Hb_002039_050 0.180368169 - - PREDICTED: U-box domain-containing protein 40 [Jatropha curcas]

Gene co-expression network

sample Hb_006745_010 Hb_006745_010 Hb_030827_060 Hb_030827_060 Hb_006745_010--Hb_030827_060 Hb_000422_110 Hb_000422_110 Hb_006745_010--Hb_000422_110 Hb_001307_010 Hb_001307_010 Hb_006745_010--Hb_001307_010 Hb_004648_070 Hb_004648_070 Hb_006745_010--Hb_004648_070 Hb_000979_240 Hb_000979_240 Hb_006745_010--Hb_000979_240 Hb_002999_060 Hb_002999_060 Hb_006745_010--Hb_002999_060 Hb_030827_060--Hb_000422_110 Hb_026198_040 Hb_026198_040 Hb_030827_060--Hb_026198_040 Hb_104265_030 Hb_104265_030 Hb_030827_060--Hb_104265_030 Hb_018133_030 Hb_018133_030 Hb_030827_060--Hb_018133_030 Hb_004449_050 Hb_004449_050 Hb_030827_060--Hb_004449_050 Hb_030827_060--Hb_002999_060 Hb_013749_020 Hb_013749_020 Hb_000422_110--Hb_013749_020 Hb_007813_030 Hb_007813_030 Hb_000422_110--Hb_007813_030 Hb_002073_280 Hb_002073_280 Hb_000422_110--Hb_002073_280 Hb_000574_510 Hb_000574_510 Hb_000422_110--Hb_000574_510 Hb_000544_060 Hb_000544_060 Hb_000422_110--Hb_000544_060 Hb_167381_020 Hb_167381_020 Hb_001307_010--Hb_167381_020 Hb_001307_010--Hb_000422_110 Hb_031711_010 Hb_031711_010 Hb_001307_010--Hb_031711_010 Hb_009771_100 Hb_009771_100 Hb_001307_010--Hb_009771_100 Hb_011909_060 Hb_011909_060 Hb_001307_010--Hb_011909_060 Hb_001454_220 Hb_001454_220 Hb_001307_010--Hb_001454_220 Hb_001514_060 Hb_001514_060 Hb_004648_070--Hb_001514_060 Hb_012038_010 Hb_012038_010 Hb_004648_070--Hb_012038_010 Hb_002387_070 Hb_002387_070 Hb_004648_070--Hb_002387_070 Hb_000139_180 Hb_000139_180 Hb_004648_070--Hb_000139_180 Hb_000015_160 Hb_000015_160 Hb_004648_070--Hb_000015_160 Hb_000175_350 Hb_000175_350 Hb_000979_240--Hb_000175_350 Hb_001488_270 Hb_001488_270 Hb_000979_240--Hb_001488_270 Hb_000197_290 Hb_000197_290 Hb_000979_240--Hb_000197_290 Hb_000751_140 Hb_000751_140 Hb_000979_240--Hb_000751_140 Hb_000599_130 Hb_000599_130 Hb_000979_240--Hb_000599_130 Hb_000979_240--Hb_000574_510 Hb_013394_060 Hb_013394_060 Hb_002999_060--Hb_013394_060 Hb_002965_030 Hb_002965_030 Hb_002999_060--Hb_002965_030 Hb_000720_070 Hb_000720_070 Hb_002999_060--Hb_000720_070 Hb_000483_380 Hb_000483_380 Hb_002999_060--Hb_000483_380 Hb_002999_060--Hb_000422_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
104.522 432.411 82.5888 215.934 293.331 132.933
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
34.3593 41.8259 40.9148 35.6774 70.2597

CAGE analysis