Hb_002485_040

Information

Type -
Description -
Location Contig2485: 75052-76833
Sequence    

Annotation

kegg
ID rcu:RCOM_0146070
description hypothetical protein
nr
ID XP_012076269.1
description PREDICTED: uncharacterized protein LOC105637426 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KH06
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12826 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002485_040 0.0 - - PREDICTED: uncharacterized protein LOC105637426 [Jatropha curcas]
2 Hb_000123_350 0.0739796455 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]
3 Hb_012082_010 0.0857112449 - - PREDICTED: transcription factor GTE4 isoform X1 [Jatropha curcas]
4 Hb_001865_060 0.0967812382 - - PREDICTED: uncharacterized protein LOC105647962 [Jatropha curcas]
5 Hb_002774_150 0.108388361 - - PREDICTED: F-box protein At1g22220 [Jatropha curcas]
6 Hb_125126_010 0.1116764966 desease resistance Gene Name: NB-ARC resistance family protein [Populus trichocarpa]
7 Hb_000896_060 0.1150913964 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
8 Hb_000130_280 0.1231049604 - - PREDICTED: transcription factor GTE3, chloroplastic isoform X2 [Jatropha curcas]
9 Hb_014834_060 0.1263006793 - - PREDICTED: uncharacterized protein LOC105632277 isoform X1 [Jatropha curcas]
10 Hb_003506_070 0.1267342472 - - PREDICTED: calcineurin B-like protein 7 isoform X2 [Jatropha curcas]
11 Hb_000526_060 0.127081287 - - PREDICTED: clustered mitochondria protein [Jatropha curcas]
12 Hb_002942_110 0.1273637572 transcription factor TF Family: ARF PREDICTED: auxin response factor 2-like [Jatropha curcas]
13 Hb_006111_030 0.1278297899 - - PREDICTED: phospholipase A(1) LCAT3 isoform X1 [Jatropha curcas]
14 Hb_001141_360 0.1294517579 - - PREDICTED: FRIGIDA-like protein 4a [Jatropha curcas]
15 Hb_003120_050 0.1296270092 - - PREDICTED: uncharacterized protein LOC105635312 [Jatropha curcas]
16 Hb_004324_060 0.129835089 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
17 Hb_044653_020 0.1302982353 transcription factor, desease resistance TF Family: GNAT, Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
18 Hb_012038_010 0.1331498726 - - phospholipid-transporting atpase, putative [Ricinus communis]
19 Hb_000465_080 0.1363413733 - - PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Jatropha curcas]
20 Hb_000540_110 0.1373899873 - - hypothetical protein PRUPE_ppa000777mg [Prunus persica]

Gene co-expression network

sample Hb_002485_040 Hb_002485_040 Hb_000123_350 Hb_000123_350 Hb_002485_040--Hb_000123_350 Hb_012082_010 Hb_012082_010 Hb_002485_040--Hb_012082_010 Hb_001865_060 Hb_001865_060 Hb_002485_040--Hb_001865_060 Hb_002774_150 Hb_002774_150 Hb_002485_040--Hb_002774_150 Hb_125126_010 Hb_125126_010 Hb_002485_040--Hb_125126_010 Hb_000896_060 Hb_000896_060 Hb_002485_040--Hb_000896_060 Hb_000123_350--Hb_000896_060 Hb_014834_060 Hb_014834_060 Hb_000123_350--Hb_014834_060 Hb_000526_060 Hb_000526_060 Hb_000123_350--Hb_000526_060 Hb_003060_090 Hb_003060_090 Hb_000123_350--Hb_003060_090 Hb_000123_350--Hb_012082_010 Hb_044653_020 Hb_044653_020 Hb_012082_010--Hb_044653_020 Hb_012082_010--Hb_000896_060 Hb_003018_040 Hb_003018_040 Hb_012082_010--Hb_003018_040 Hb_000218_020 Hb_000218_020 Hb_012082_010--Hb_000218_020 Hb_000130_280 Hb_000130_280 Hb_012082_010--Hb_000130_280 Hb_001141_360 Hb_001141_360 Hb_001865_060--Hb_001141_360 Hb_012725_040 Hb_012725_040 Hb_001865_060--Hb_012725_040 Hb_000062_080 Hb_000062_080 Hb_001865_060--Hb_000062_080 Hb_003494_060 Hb_003494_060 Hb_001865_060--Hb_003494_060 Hb_004032_310 Hb_004032_310 Hb_001865_060--Hb_004032_310 Hb_004324_060 Hb_004324_060 Hb_002774_150--Hb_004324_060 Hb_012038_010 Hb_012038_010 Hb_002774_150--Hb_012038_010 Hb_172421_010 Hb_172421_010 Hb_002774_150--Hb_172421_010 Hb_004994_300 Hb_004994_300 Hb_002774_150--Hb_004994_300 Hb_012753_040 Hb_012753_040 Hb_002774_150--Hb_012753_040 Hb_125126_010--Hb_000130_280 Hb_006738_050 Hb_006738_050 Hb_125126_010--Hb_006738_050 Hb_004310_040 Hb_004310_040 Hb_125126_010--Hb_004310_040 Hb_011249_060 Hb_011249_060 Hb_125126_010--Hb_011249_060 Hb_005188_040 Hb_005188_040 Hb_125126_010--Hb_005188_040 Hb_125126_010--Hb_000123_350 Hb_000896_060--Hb_000526_060 Hb_000896_060--Hb_014834_060 Hb_000117_070 Hb_000117_070 Hb_000896_060--Hb_000117_070 Hb_000896_060--Hb_044653_020 Hb_012368_100 Hb_012368_100 Hb_000896_060--Hb_012368_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
38.2654 168.731 38.879 23.9022 38.0696 38.6236
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.7957 11.163 16.026 25.5095 39.9807

CAGE analysis