Hb_012725_040

Information

Type -
Description -
Location Contig12725: 54158-55285
Sequence    

Annotation

kegg
ID rcu:RCOM_1002910
description receptor serine-threonine protein kinase, putative (EC:2.7.10.1)
nr
ID XP_002519301.1
description receptor serine-threonine protein kinase, putative [Ricinus communis]
swissprot
ID Q8RZV7
description Leucine-rich repeat receptor protein kinase MSP1 OS=Oryza sativa subsp. japonica GN=MSP1 PE=1 SV=1
trembl
ID B9RZY2
description Receptor serine-threonine protein kinase, putative OS=Ricinus communis GN=RCOM_1002910 PE=3 SV=1
Gene Ontology
ID GO:0004674
description leucine-rich repeat receptor protein kinase exs-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012725_040 0.0 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
2 Hb_185513_010 0.0740732022 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001865_060 0.0890510474 - - PREDICTED: uncharacterized protein LOC105647962 [Jatropha curcas]
4 Hb_006111_030 0.109320568 - - PREDICTED: phospholipase A(1) LCAT3 isoform X1 [Jatropha curcas]
5 Hb_001258_150 0.1116424815 - - PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Jatropha curcas]
6 Hb_003494_060 0.1134472592 - - PREDICTED: uncharacterized protein LOC105644062 isoform X1 [Jatropha curcas]
7 Hb_001141_360 0.1192328553 - - PREDICTED: FRIGIDA-like protein 4a [Jatropha curcas]
8 Hb_005203_020 0.1243395504 transcription factor TF Family: TRAF Regulatory protein NPR1, putative [Ricinus communis]
9 Hb_162074_010 0.1254920707 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
10 Hb_004032_310 0.1330859398 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 14 [Jatropha curcas]
11 Hb_000836_370 0.1337246615 - - PREDICTED: protein REVEILLE 3-like isoform X1 [Jatropha curcas]
12 Hb_005000_300 0.1340838046 transcription factor TF Family: TRAF putative regulatory protein NPR1 [Hevea brasiliensis]
13 Hb_000465_080 0.1345569319 - - PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Jatropha curcas]
14 Hb_001489_120 0.1352991739 - - PREDICTED: alpha-amylase 3, chloroplastic [Jatropha curcas]
15 Hb_000117_060 0.1366461814 - - PREDICTED: uncharacterized protein LOC103949199 [Pyrus x bretschneideri]
16 Hb_003078_030 0.1366876915 - - PREDICTED: E3 ubiquitin-protein ligase CHIP [Jatropha curcas]
17 Hb_003637_020 0.1372196386 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000062_080 0.1398760699 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR11-like [Jatropha curcas]
19 Hb_001231_080 0.1406684 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Fragaria vesca subsp. vesca]
20 Hb_056012_010 0.1415894482 - - PREDICTED: TMV resistance protein N-like [Pyrus x bretschneideri]

Gene co-expression network

sample Hb_012725_040 Hb_012725_040 Hb_185513_010 Hb_185513_010 Hb_012725_040--Hb_185513_010 Hb_001865_060 Hb_001865_060 Hb_012725_040--Hb_001865_060 Hb_006111_030 Hb_006111_030 Hb_012725_040--Hb_006111_030 Hb_001258_150 Hb_001258_150 Hb_012725_040--Hb_001258_150 Hb_003494_060 Hb_003494_060 Hb_012725_040--Hb_003494_060 Hb_001141_360 Hb_001141_360 Hb_012725_040--Hb_001141_360 Hb_003637_020 Hb_003637_020 Hb_185513_010--Hb_003637_020 Hb_103788_010 Hb_103788_010 Hb_185513_010--Hb_103788_010 Hb_056012_010 Hb_056012_010 Hb_185513_010--Hb_056012_010 Hb_000117_060 Hb_000117_060 Hb_185513_010--Hb_000117_060 Hb_185513_010--Hb_001865_060 Hb_001865_060--Hb_001141_360 Hb_000062_080 Hb_000062_080 Hb_001865_060--Hb_000062_080 Hb_002485_040 Hb_002485_040 Hb_001865_060--Hb_002485_040 Hb_001865_060--Hb_003494_060 Hb_004032_310 Hb_004032_310 Hb_001865_060--Hb_004032_310 Hb_006111_030--Hb_001865_060 Hb_000071_140 Hb_000071_140 Hb_006111_030--Hb_000071_140 Hb_006111_030--Hb_001258_150 Hb_006111_030--Hb_004032_310 Hb_006111_030--Hb_002485_040 Hb_001489_120 Hb_001489_120 Hb_001258_150--Hb_001489_120 Hb_000803_060 Hb_000803_060 Hb_001258_150--Hb_000803_060 Hb_001258_150--Hb_004032_310 Hb_001258_150--Hb_000071_140 Hb_011360_090 Hb_011360_090 Hb_001258_150--Hb_011360_090 Hb_003494_060--Hb_001141_360 Hb_000483_040 Hb_000483_040 Hb_003494_060--Hb_000483_040 Hb_009838_060 Hb_009838_060 Hb_003494_060--Hb_009838_060 Hb_003494_060--Hb_000062_080 Hb_001141_360--Hb_000062_080 Hb_003120_050 Hb_003120_050 Hb_001141_360--Hb_003120_050 Hb_012226_010 Hb_012226_010 Hb_001141_360--Hb_012226_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.1542 90.16 17.761 20.1131 14.5393 17.6254
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.64366 5.74146 4.90836 9.01789 6.09698

CAGE analysis