Hb_004746_010

Information

Type -
Description -
Location Contig4746: 59281-62835
Sequence    

Annotation

kegg
ID rcu:RCOM_1427600
description aldo/keto reductase, putative (EC:1.1.1.65)
nr
ID XP_002512216.1
description aldo/keto reductase, putative [Ricinus communis]
swissprot
ID C6TBN2
description Probable aldo-keto reductase 1 OS=Glycine max GN=AKR1 PE=2 SV=1
trembl
ID B9REP7
description Aldo/keto reductase, putative OS=Ricinus communis GN=RCOM_1427600 PE=4 SV=1
Gene Ontology
ID GO:0050236
description probable aldo-keto reductase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44479: 59011-62837 , PASA_asmbl_44480: 59011-60636
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004746_010 0.0 - - aldo/keto reductase, putative [Ricinus communis]
2 Hb_000984_140 0.1125403222 - - PREDICTED: xylulose kinase [Jatropha curcas]
3 Hb_001434_020 0.1125941244 - - hypothetical protein RCOM_0841800 [Ricinus communis]
4 Hb_004204_210 0.1144271387 - - PREDICTED: heparanase-like protein 1 [Jatropha curcas]
5 Hb_001677_100 0.1183285313 - - delta1-pyrroline-5-carboxylate synthase [Manihot esculenta]
6 Hb_024758_020 0.1229248362 - - acyl-CoA binding protein 3B [Vernicia fordii]
7 Hb_005772_030 0.1249829685 - - PREDICTED: protein trichome birefringence-like 35 [Jatropha curcas]
8 Hb_024570_040 0.1288605323 - - PREDICTED: clathrin interactor EPSIN 1 [Jatropha curcas]
9 Hb_002284_100 0.1319383214 - - ribophorin, putative [Ricinus communis]
10 Hb_005701_090 0.1332916536 - - PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic isoform X1 [Jatropha curcas]
11 Hb_002093_050 0.1339887297 - - hypothetical protein POPTR_0008s02940g [Populus trichocarpa]
12 Hb_001053_080 0.1356367023 - - OsCesA3 protein [Morus notabilis]
13 Hb_004602_020 0.1370275246 transcription factor TF Family: SET PREDICTED: N-lysine methyltransferase setd6 isoform X2 [Jatropha curcas]
14 Hb_002392_020 0.1404819068 - - PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [Jatropha curcas]
15 Hb_000358_210 0.1407674265 - - oligosaccharyl transferase, putative [Ricinus communis]
16 Hb_000562_100 0.142647194 - - PREDICTED: protein IQ-DOMAIN 32 [Jatropha curcas]
17 Hb_012353_040 0.1438298003 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
18 Hb_003849_120 0.147259189 - - PREDICTED: uncharacterized protein LOC100264440 [Vitis vinifera]
19 Hb_002849_050 0.148195781 - - PREDICTED: probable serine/threonine-protein kinase At1g01540 [Jatropha curcas]
20 Hb_000248_100 0.1483620045 - - PREDICTED: NADPH-dependent thioredoxin reductase 3 [Populus euphratica]

Gene co-expression network

sample Hb_004746_010 Hb_004746_010 Hb_000984_140 Hb_000984_140 Hb_004746_010--Hb_000984_140 Hb_001434_020 Hb_001434_020 Hb_004746_010--Hb_001434_020 Hb_004204_210 Hb_004204_210 Hb_004746_010--Hb_004204_210 Hb_001677_100 Hb_001677_100 Hb_004746_010--Hb_001677_100 Hb_024758_020 Hb_024758_020 Hb_004746_010--Hb_024758_020 Hb_005772_030 Hb_005772_030 Hb_004746_010--Hb_005772_030 Hb_021977_010 Hb_021977_010 Hb_000984_140--Hb_021977_010 Hb_000984_140--Hb_005772_030 Hb_001140_180 Hb_001140_180 Hb_000984_140--Hb_001140_180 Hb_005854_040 Hb_005854_040 Hb_000984_140--Hb_005854_040 Hb_000984_140--Hb_004204_210 Hb_001414_010 Hb_001414_010 Hb_000984_140--Hb_001414_010 Hb_001434_020--Hb_001677_100 Hb_002392_020 Hb_002392_020 Hb_001434_020--Hb_002392_020 Hb_007943_150 Hb_007943_150 Hb_001434_020--Hb_007943_150 Hb_009296_020 Hb_009296_020 Hb_001434_020--Hb_009296_020 Hb_000358_210 Hb_000358_210 Hb_001434_020--Hb_000358_210 Hb_070624_010 Hb_070624_010 Hb_001434_020--Hb_070624_010 Hb_004204_210--Hb_005772_030 Hb_003470_070 Hb_003470_070 Hb_004204_210--Hb_003470_070 Hb_004204_210--Hb_001140_180 Hb_005701_090 Hb_005701_090 Hb_004204_210--Hb_005701_090 Hb_004297_090 Hb_004297_090 Hb_001677_100--Hb_004297_090 Hb_001677_100--Hb_009296_020 Hb_000260_400 Hb_000260_400 Hb_001677_100--Hb_000260_400 Hb_011214_110 Hb_011214_110 Hb_001677_100--Hb_011214_110 Hb_002849_050 Hb_002849_050 Hb_001677_100--Hb_002849_050 Hb_024758_020--Hb_002849_050 Hb_158845_060 Hb_158845_060 Hb_024758_020--Hb_158845_060 Hb_005298_020 Hb_005298_020 Hb_024758_020--Hb_005298_020 Hb_000297_030 Hb_000297_030 Hb_024758_020--Hb_000297_030 Hb_032823_020 Hb_032823_020 Hb_024758_020--Hb_032823_020 Hb_003964_110 Hb_003964_110 Hb_024758_020--Hb_003964_110 Hb_002809_160 Hb_002809_160 Hb_005772_030--Hb_002809_160 Hb_012353_040 Hb_012353_040 Hb_005772_030--Hb_012353_040 Hb_002025_270 Hb_002025_270 Hb_005772_030--Hb_002025_270 Hb_009078_020 Hb_009078_020 Hb_005772_030--Hb_009078_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.9116 17.2149 41.0787 40.2574 22.3161 11.2286
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.50045 3.59443 3.03301 44.2983 35.7552

CAGE analysis