Hb_003506_070

Information

Type -
Description -
Location Contig3506: 88169-90731
Sequence    

Annotation

kegg
ID rcu:RCOM_1243080
description calcineurin B, putative
nr
ID XP_012065482.1
description PREDICTED: calcineurin B-like protein 7 isoform X2 [Jatropha curcas]
swissprot
ID O81223
description Calcineurin B-like protein 4 OS=Arabidopsis thaliana GN=CBL4 PE=1 SV=3
trembl
ID A0A067LGF6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22964 PE=4 SV=1
Gene Ontology
ID GO:0005509
description calcineurin b-like protein 4 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36507: 87606-87967 , PASA_asmbl_36508: 88280-89234
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003506_070 0.0 - - PREDICTED: calcineurin B-like protein 7 isoform X2 [Jatropha curcas]
2 Hb_000465_080 0.1007365317 - - PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Jatropha curcas]
3 Hb_003125_030 0.1015966714 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
4 Hb_000540_110 0.1062729892 - - hypothetical protein PRUPE_ppa000777mg [Prunus persica]
5 Hb_001525_010 0.1110759895 - - PREDICTED: uncharacterized protein LOC105638298 [Jatropha curcas]
6 Hb_011909_060 0.112649554 - - PREDICTED: zinc finger protein CONSTANS-LIKE 1 [Jatropha curcas]
7 Hb_004218_090 0.1145174496 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
8 Hb_005000_300 0.1199544108 transcription factor TF Family: TRAF putative regulatory protein NPR1 [Hevea brasiliensis]
9 Hb_018301_010 0.1233550923 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Jatropha curcas]
10 Hb_000061_490 0.1245561551 - - hypothetical protein CISIN_1g0362002mg, partial [Citrus sinensis]
11 Hb_000363_280 0.1265362063 transcription factor TF Family: SWI/SNF-BAF60b PREDICTED: angiomotin [Cucumis sativus]
12 Hb_002485_040 0.1267342472 - - PREDICTED: uncharacterized protein LOC105637426 [Jatropha curcas]
13 Hb_000123_350 0.1281426514 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]
14 Hb_006738_050 0.1285717498 - - PREDICTED: uncharacterized protein LOC105634992 [Jatropha curcas]
15 Hb_009771_100 0.1295133621 - - PREDICTED: uncharacterized protein LOC105141784 [Populus euphratica]
16 Hb_001231_080 0.1304095567 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Fragaria vesca subsp. vesca]
17 Hb_003411_110 0.1307912972 - - PREDICTED: uncharacterized protein LOC105642013 [Jatropha curcas]
18 Hb_012082_010 0.1308781379 - - PREDICTED: transcription factor GTE4 isoform X1 [Jatropha curcas]
19 Hb_012226_010 0.1337281622 - - PREDICTED: protein DGCR14 [Jatropha curcas]
20 Hb_125126_010 0.1350189069 desease resistance Gene Name: NB-ARC resistance family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_003506_070 Hb_003506_070 Hb_000465_080 Hb_000465_080 Hb_003506_070--Hb_000465_080 Hb_003125_030 Hb_003125_030 Hb_003506_070--Hb_003125_030 Hb_000540_110 Hb_000540_110 Hb_003506_070--Hb_000540_110 Hb_001525_010 Hb_001525_010 Hb_003506_070--Hb_001525_010 Hb_011909_060 Hb_011909_060 Hb_003506_070--Hb_011909_060 Hb_004218_090 Hb_004218_090 Hb_003506_070--Hb_004218_090 Hb_005000_300 Hb_005000_300 Hb_000465_080--Hb_005000_300 Hb_000465_080--Hb_004218_090 Hb_046117_010 Hb_046117_010 Hb_000465_080--Hb_046117_010 Hb_003120_050 Hb_003120_050 Hb_000465_080--Hb_003120_050 Hb_003078_030 Hb_003078_030 Hb_000465_080--Hb_003078_030 Hb_104265_030 Hb_104265_030 Hb_003125_030--Hb_104265_030 Hb_012226_010 Hb_012226_010 Hb_003125_030--Hb_012226_010 Hb_000540_120 Hb_000540_120 Hb_003125_030--Hb_000540_120 Hb_003125_030--Hb_001525_010 Hb_000327_280 Hb_000327_280 Hb_003125_030--Hb_000327_280 Hb_125126_010 Hb_125126_010 Hb_000540_110--Hb_125126_010 Hb_000130_280 Hb_000130_280 Hb_000540_110--Hb_000130_280 Hb_000540_110--Hb_001525_010 Hb_014834_060 Hb_014834_060 Hb_000540_110--Hb_014834_060 Hb_010712_040 Hb_010712_040 Hb_000540_110--Hb_010712_040 Hb_028207_040 Hb_028207_040 Hb_001525_010--Hb_028207_040 Hb_000953_050 Hb_000953_050 Hb_001525_010--Hb_000953_050 Hb_116086_010 Hb_116086_010 Hb_001525_010--Hb_116086_010 Hb_000363_280 Hb_000363_280 Hb_011909_060--Hb_000363_280 Hb_000120_420 Hb_000120_420 Hb_011909_060--Hb_000120_420 Hb_009771_100 Hb_009771_100 Hb_011909_060--Hb_009771_100 Hb_031711_010 Hb_031711_010 Hb_011909_060--Hb_031711_010 Hb_001141_370 Hb_001141_370 Hb_011909_060--Hb_001141_370 Hb_002997_160 Hb_002997_160 Hb_011909_060--Hb_002997_160 Hb_018301_010 Hb_018301_010 Hb_004218_090--Hb_018301_010 Hb_127599_010 Hb_127599_010 Hb_004218_090--Hb_127599_010 Hb_006683_040 Hb_006683_040 Hb_004218_090--Hb_006683_040 Hb_000061_490 Hb_000061_490 Hb_004218_090--Hb_000061_490 Hb_004218_090--Hb_000120_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.74195 12.9061 3.86887 2.37262 2.54796 4.63346
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.781 1.35824 2.72503 1.74325 1.98968

CAGE analysis