Hb_000327_280

Information

Type -
Description -
Location Contig327: 310654-321113
Sequence    

Annotation

kegg
ID rcu:RCOM_0745050
description hypothetical protein
nr
ID XP_012073430.1
description PREDICTED: uncharacterized protein LOC105635045 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LMS1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06636 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000327_280 0.0 - - PREDICTED: uncharacterized protein LOC105635045 isoform X1 [Jatropha curcas]
2 Hb_000189_100 0.0794337272 - - PREDICTED: mediator of RNA polymerase II transcription subunit 14 [Jatropha curcas]
3 Hb_006663_040 0.0802702775 - - PREDICTED: DDB1- and CUL4-associated factor homolog 1 isoform X2 [Jatropha curcas]
4 Hb_000120_660 0.0827690915 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
5 Hb_157966_010 0.0867275919 - - hypothetical protein JCGZ_13877 [Jatropha curcas]
6 Hb_000832_320 0.0883474142 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]
7 Hb_003729_030 0.0884925743 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [Jatropha curcas]
8 Hb_000977_120 0.09236594 - - PREDICTED: sister chromatid cohesion 1 protein 4 isoform X2 [Jatropha curcas]
9 Hb_052764_060 0.0938691228 - - XPA-binding protein, putative [Ricinus communis]
10 Hb_000941_130 0.0938768222 - - gamma-tubulin complex component, putative [Ricinus communis]
11 Hb_000345_150 0.0972301684 - - PREDICTED: uncharacterized protein LOC105647517 isoform X1 [Jatropha curcas]
12 Hb_018133_050 0.0980097764 - - PREDICTED: protein MODIFIER OF SNC1 1 [Jatropha curcas]
13 Hb_093084_070 0.0981428195 desease resistance Gene Name: Baculo_PEP_C Disease resistance protein RPP13, putative [Ricinus communis]
14 Hb_000321_150 0.0994306048 - - PREDICTED: uncharacterized protein LOC105645596 isoform X1 [Jatropha curcas]
15 Hb_000260_640 0.1012632283 - - PREDICTED: uncharacterized protein At1g51745 [Jatropha curcas]
16 Hb_001967_030 0.1031249167 - - PREDICTED: uncharacterized protein LOC105633557 [Jatropha curcas]
17 Hb_004480_040 0.1031518607 - - PREDICTED: DDB1- and CUL4-associated factor homolog 1 isoform X2 [Jatropha curcas]
18 Hb_003373_040 0.1037522615 - - hypothetical protein ARALYDRAFT_356474 [Arabidopsis lyrata subsp. lyrata]
19 Hb_000780_170 0.1040161776 - - PREDICTED: OBERON-like protein [Jatropha curcas]
20 Hb_000236_220 0.104580959 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-5 [Jatropha curcas]

Gene co-expression network

sample Hb_000327_280 Hb_000327_280 Hb_000189_100 Hb_000189_100 Hb_000327_280--Hb_000189_100 Hb_006663_040 Hb_006663_040 Hb_000327_280--Hb_006663_040 Hb_000120_660 Hb_000120_660 Hb_000327_280--Hb_000120_660 Hb_157966_010 Hb_157966_010 Hb_000327_280--Hb_157966_010 Hb_000832_320 Hb_000832_320 Hb_000327_280--Hb_000832_320 Hb_003729_030 Hb_003729_030 Hb_000327_280--Hb_003729_030 Hb_000189_100--Hb_006663_040 Hb_018133_050 Hb_018133_050 Hb_000189_100--Hb_018133_050 Hb_000189_100--Hb_000832_320 Hb_052764_060 Hb_052764_060 Hb_000189_100--Hb_052764_060 Hb_000061_510 Hb_000061_510 Hb_000189_100--Hb_000061_510 Hb_006663_040--Hb_052764_060 Hb_006663_040--Hb_000832_320 Hb_006663_040--Hb_018133_050 Hb_006663_040--Hb_157966_010 Hb_000544_060 Hb_000544_060 Hb_006663_040--Hb_000544_060 Hb_000120_660--Hb_003729_030 Hb_004629_010 Hb_004629_010 Hb_000120_660--Hb_004629_010 Hb_000120_660--Hb_157966_010 Hb_005104_010 Hb_005104_010 Hb_000120_660--Hb_005104_010 Hb_000780_170 Hb_000780_170 Hb_000120_660--Hb_000780_170 Hb_008253_030 Hb_008253_030 Hb_000120_660--Hb_008253_030 Hb_004659_080 Hb_004659_080 Hb_157966_010--Hb_004659_080 Hb_000622_250 Hb_000622_250 Hb_157966_010--Hb_000622_250 Hb_157966_010--Hb_018133_050 Hb_007676_100 Hb_007676_100 Hb_157966_010--Hb_007676_100 Hb_000832_320--Hb_018133_050 Hb_004480_040 Hb_004480_040 Hb_000832_320--Hb_004480_040 Hb_000832_320--Hb_052764_060 Hb_000832_320--Hb_000544_060 Hb_000959_040 Hb_000959_040 Hb_000832_320--Hb_000959_040 Hb_000321_150 Hb_000321_150 Hb_003729_030--Hb_000321_150 Hb_000069_470 Hb_000069_470 Hb_003729_030--Hb_000069_470 Hb_002253_080 Hb_002253_080 Hb_003729_030--Hb_002253_080 Hb_000260_070 Hb_000260_070 Hb_003729_030--Hb_000260_070 Hb_011242_060 Hb_011242_060 Hb_003729_030--Hb_011242_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.8369 37.0323 7.43777 11.4831 16.7207 19.0768
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.88296 5.45329 15.1453 10.7316 10.6352

CAGE analysis