Hb_002811_240

Information

Type -
Description -
Location Contig2811: 194845-196518
Sequence    

Annotation

kegg
ID rcu:RCOM_1427790
description hypothetical protein
nr
ID XP_002512224.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9REQ5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1427790 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002811_240 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000680_070 0.1414670572 - - PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Jatropha curcas]
3 Hb_005455_010 0.1718278421 - - PREDICTED: probable acyl-activating enzyme 18, peroxisomal isoform X1 [Jatropha curcas]
4 Hb_001754_120 0.1830043027 - - PREDICTED: probable protein phosphatase 2C 40 [Jatropha curcas]
5 Hb_001040_150 0.1871701611 - - conserved hypothetical protein [Ricinus communis]
6 Hb_178968_080 0.1972256462 - - PREDICTED: serine/threonine-protein kinase OSR1 isoform X2 [Jatropha curcas]
7 Hb_000032_600 0.198536854 - - PREDICTED: B2 protein [Jatropha curcas]
8 Hb_001439_010 0.1993315825 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 5-like [Jatropha curcas]
9 Hb_000313_230 0.2006619257 - - PREDICTED: uncharacterized protein LOC105636893 [Jatropha curcas]
10 Hb_008066_080 0.2065671512 - - PREDICTED: GDSL esterase/lipase 1-like [Jatropha curcas]
11 Hb_113119_010 0.2093816217 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_001675_270 0.2096893613 - - PREDICTED: probable inactive nicotinamidase At3g16190 [Jatropha curcas]
13 Hb_001205_060 0.2106361356 - - PREDICTED: protein N-lysine methyltransferase METTL21A [Jatropha curcas]
14 Hb_006469_090 0.2109211994 - - PREDICTED: LOW QUALITY PROTEIN: myosin-11 [Jatropha curcas]
15 Hb_002949_020 0.212999122 transcription factor TF Family: bHLH hypothetical protein POPTR_0002s23650g [Populus trichocarpa]
16 Hb_002248_010 0.2130129939 - - PREDICTED: uncharacterized protein LOC105124180 [Populus euphratica]
17 Hb_005568_050 0.2130483457 - - ascorbate peroxidase [Hevea brasiliensis]
18 Hb_006370_050 0.2132565107 - - Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao]
19 Hb_001360_030 0.2152815568 - - PREDICTED: ACT domain-containing protein ACR10 [Jatropha curcas]
20 Hb_005663_090 0.2159207312 - - PREDICTED: alcohol dehydrogenase-like 7 [Jatropha curcas]

Gene co-expression network

sample Hb_002811_240 Hb_002811_240 Hb_000680_070 Hb_000680_070 Hb_002811_240--Hb_000680_070 Hb_005455_010 Hb_005455_010 Hb_002811_240--Hb_005455_010 Hb_001754_120 Hb_001754_120 Hb_002811_240--Hb_001754_120 Hb_001040_150 Hb_001040_150 Hb_002811_240--Hb_001040_150 Hb_178968_080 Hb_178968_080 Hb_002811_240--Hb_178968_080 Hb_000032_600 Hb_000032_600 Hb_002811_240--Hb_000032_600 Hb_001439_010 Hb_001439_010 Hb_000680_070--Hb_001439_010 Hb_005663_090 Hb_005663_090 Hb_000680_070--Hb_005663_090 Hb_006469_090 Hb_006469_090 Hb_000680_070--Hb_006469_090 Hb_000337_030 Hb_000337_030 Hb_000680_070--Hb_000337_030 Hb_007850_110 Hb_007850_110 Hb_000680_070--Hb_007850_110 Hb_004032_110 Hb_004032_110 Hb_000680_070--Hb_004032_110 Hb_138229_010 Hb_138229_010 Hb_005455_010--Hb_138229_010 Hb_000699_050 Hb_000699_050 Hb_005455_010--Hb_000699_050 Hb_001226_100 Hb_001226_100 Hb_005455_010--Hb_001226_100 Hb_007007_130 Hb_007007_130 Hb_005455_010--Hb_007007_130 Hb_000152_770 Hb_000152_770 Hb_005455_010--Hb_000152_770 Hb_033152_110 Hb_033152_110 Hb_001754_120--Hb_033152_110 Hb_001754_120--Hb_000032_600 Hb_000979_260 Hb_000979_260 Hb_001754_120--Hb_000979_260 Hb_005731_100 Hb_005731_100 Hb_001754_120--Hb_005731_100 Hb_000622_060 Hb_000622_060 Hb_001754_120--Hb_000622_060 Hb_001124_140 Hb_001124_140 Hb_001754_120--Hb_001124_140 Hb_006185_030 Hb_006185_030 Hb_001040_150--Hb_006185_030 Hb_009803_020 Hb_009803_020 Hb_001040_150--Hb_009803_020 Hb_098533_010 Hb_098533_010 Hb_001040_150--Hb_098533_010 Hb_007229_050 Hb_007229_050 Hb_001040_150--Hb_007229_050 Hb_001040_150--Hb_178968_080 Hb_000625_030 Hb_000625_030 Hb_001040_150--Hb_000625_030 Hb_000130_200 Hb_000130_200 Hb_178968_080--Hb_000130_200 Hb_178968_080--Hb_000032_600 Hb_000070_110 Hb_000070_110 Hb_178968_080--Hb_000070_110 Hb_178968_080--Hb_000622_060 Hb_001054_060 Hb_001054_060 Hb_178968_080--Hb_001054_060 Hb_067664_010 Hb_067664_010 Hb_000032_600--Hb_067664_010 Hb_000032_600--Hb_001054_060 Hb_000977_150 Hb_000977_150 Hb_000032_600--Hb_000977_150 Hb_000032_600--Hb_000130_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0544915 0.160103 0.790518 0.663888 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.187818 0 0.179002 1.05412 1.09302

CAGE analysis