Hb_002267_100

Information

Type -
Description -
Location Contig2267: 91682-92779
Sequence    

Annotation

kegg
ID rcu:RCOM_1491960
description hypothetical protein
nr
ID XP_012073417.1
description PREDICTED: uncharacterized protein LOC105635033 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9RQH6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1491960 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002267_100 0.0 - - PREDICTED: uncharacterized protein LOC105635033 isoform X2 [Jatropha curcas]
2 Hb_002518_090 0.1778033862 - - PREDICTED: tubulin beta-2 chain [Jatropha curcas]
3 Hb_002739_040 0.1823027512 - - PREDICTED: isocitrate dehydrogenase [NADP] [Jatropha curcas]
4 Hb_139785_020 0.1823329051 - - PREDICTED: uncharacterized protein LOC105641137 [Jatropha curcas]
5 Hb_000186_290 0.2040623892 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 [Jatropha curcas]
6 Hb_004958_020 0.2069472412 - - PREDICTED: uncharacterized protein LOC104609039 [Nelumbo nucifera]
7 Hb_000172_280 0.2102580997 - - aspartate aminotransferase, putative [Ricinus communis]
8 Hb_004958_010 0.2107157768 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001619_100 0.211648103 - - PREDICTED: uncharacterized protein LOC105630593 [Jatropha curcas]
10 Hb_001500_070 0.2124962855 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000220_110 0.213474679 - - fructose-bisphosphate aldolase, putative [Ricinus communis]
12 Hb_003972_060 0.2142811518 - - PREDICTED: UDP-arabinopyranose mutase 3 [Populus euphratica]
13 Hb_102710_010 0.2149488985 - - hypothetical protein POPTR_0006s22820g [Populus trichocarpa]
14 Hb_005181_180 0.2150578698 - - conserved hypothetical protein [Ricinus communis]
15 Hb_019863_030 0.2158845022 - - hypothetical protein JCGZ_00393 [Jatropha curcas]
16 Hb_002539_010 0.2205719672 - - hypothetical protein JCGZ_15711 [Jatropha curcas]
17 Hb_001619_030 0.2228787245 - - annexin, putative [Ricinus communis]
18 Hb_002627_020 0.2231409121 - - PREDICTED: TBC1 domain family member 2B [Jatropha curcas]
19 Hb_021409_140 0.2236463461 - - PREDICTED: trehalase isoform X1 [Jatropha curcas]
20 Hb_000309_030 0.2245774788 - - PREDICTED: formate dehydrogenase, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_002267_100 Hb_002267_100 Hb_002518_090 Hb_002518_090 Hb_002267_100--Hb_002518_090 Hb_002739_040 Hb_002739_040 Hb_002267_100--Hb_002739_040 Hb_139785_020 Hb_139785_020 Hb_002267_100--Hb_139785_020 Hb_000186_290 Hb_000186_290 Hb_002267_100--Hb_000186_290 Hb_004958_020 Hb_004958_020 Hb_002267_100--Hb_004958_020 Hb_000172_280 Hb_000172_280 Hb_002267_100--Hb_000172_280 Hb_172706_020 Hb_172706_020 Hb_002518_090--Hb_172706_020 Hb_000940_210 Hb_000940_210 Hb_002518_090--Hb_000940_210 Hb_023226_030 Hb_023226_030 Hb_002518_090--Hb_023226_030 Hb_000220_110 Hb_000220_110 Hb_002518_090--Hb_000220_110 Hb_004883_020 Hb_004883_020 Hb_002518_090--Hb_004883_020 Hb_000309_030 Hb_000309_030 Hb_002518_090--Hb_000309_030 Hb_000003_020 Hb_000003_020 Hb_002739_040--Hb_000003_020 Hb_004324_030 Hb_004324_030 Hb_002739_040--Hb_004324_030 Hb_003142_060 Hb_003142_060 Hb_002739_040--Hb_003142_060 Hb_004079_100 Hb_004079_100 Hb_002739_040--Hb_004079_100 Hb_026549_050 Hb_026549_050 Hb_002739_040--Hb_026549_050 Hb_000834_040 Hb_000834_040 Hb_002739_040--Hb_000834_040 Hb_139785_020--Hb_004958_020 Hb_001141_230 Hb_001141_230 Hb_139785_020--Hb_001141_230 Hb_004958_010 Hb_004958_010 Hb_139785_020--Hb_004958_010 Hb_139785_020--Hb_000003_020 Hb_002307_010 Hb_002307_010 Hb_139785_020--Hb_002307_010 Hb_078081_010 Hb_078081_010 Hb_000186_290--Hb_078081_010 Hb_000186_290--Hb_002739_040 Hb_164926_040 Hb_164926_040 Hb_000186_290--Hb_164926_040 Hb_000116_120 Hb_000116_120 Hb_000186_290--Hb_000116_120 Hb_004346_010 Hb_004346_010 Hb_000186_290--Hb_004346_010 Hb_021409_140 Hb_021409_140 Hb_000186_290--Hb_021409_140 Hb_004958_020--Hb_000003_020 Hb_004958_020--Hb_002739_040 Hb_000318_170 Hb_000318_170 Hb_004958_020--Hb_000318_170 Hb_001894_010 Hb_001894_010 Hb_004958_020--Hb_001894_010 Hb_004958_020--Hb_078081_010 Hb_000172_280--Hb_000220_110 Hb_002486_080 Hb_002486_080 Hb_000172_280--Hb_002486_080 Hb_124315_010 Hb_124315_010 Hb_000172_280--Hb_124315_010 Hb_000465_150 Hb_000465_150 Hb_000172_280--Hb_000465_150 Hb_000907_150 Hb_000907_150 Hb_000172_280--Hb_000907_150 Hb_001148_090 Hb_001148_090 Hb_000172_280--Hb_001148_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.195633 0.180739 0.425304 0.646321 0 0.0587988
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.153319 0.120433 0 0.908709 0.220915

CAGE analysis