Hb_139785_020

Information

Type -
Description -
Location Contig139785: 25613-26717
Sequence    

Annotation

kegg
ID pop:POPTR_0010s23590g
description POPTRDRAFT_567678; hypothetical protein
nr
ID XP_012081007.1
description PREDICTED: uncharacterized protein LOC105641137 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K2Y8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16176 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_139785_020 0.0 - - PREDICTED: uncharacterized protein LOC105641137 [Jatropha curcas]
2 Hb_004958_020 0.1505282556 - - PREDICTED: uncharacterized protein LOC104609039 [Nelumbo nucifera]
3 Hb_001141_230 0.1642642748 - - PREDICTED: uncharacterized protein LOC105632008 [Jatropha curcas]
4 Hb_004958_010 0.1796021654 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000003_020 0.1820704829 - - PREDICTED: uncharacterized protein LOC105631161 [Jatropha curcas]
6 Hb_002267_100 0.1823329051 - - PREDICTED: uncharacterized protein LOC105635033 isoform X2 [Jatropha curcas]
7 Hb_002307_010 0.1835459023 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
8 Hb_002739_040 0.1852166449 - - PREDICTED: isocitrate dehydrogenase [NADP] [Jatropha curcas]
9 Hb_006831_080 0.1929021749 - - PREDICTED: uncharacterized protein LOC105642126 [Jatropha curcas]
10 Hb_004324_030 0.1983183051 - - PREDICTED: probable protein phosphatase 2C 8 [Jatropha curcas]
11 Hb_000318_170 0.2002342679 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
12 Hb_000791_050 0.2009648586 - - PREDICTED: uncharacterized protein LOC105636760 [Jatropha curcas]
13 Hb_023226_030 0.2060489883 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Jatropha curcas]
14 Hb_000438_010 0.2086591082 - - -
15 Hb_001775_070 0.2116242183 - - PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
16 Hb_001596_020 0.2126617284 - - hypothetical protein CICLE_v10014140mg [Citrus clementina]
17 Hb_002999_080 0.2130245734 transcription factor TF Family: G2-like PREDICTED: accessory gland protein Acp36DE [Jatropha curcas]
18 Hb_008566_080 0.2161262729 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
19 Hb_003106_230 0.2169856315 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like [Jatropha curcas]
20 Hb_006528_020 0.2184901162 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_139785_020 Hb_139785_020 Hb_004958_020 Hb_004958_020 Hb_139785_020--Hb_004958_020 Hb_001141_230 Hb_001141_230 Hb_139785_020--Hb_001141_230 Hb_004958_010 Hb_004958_010 Hb_139785_020--Hb_004958_010 Hb_000003_020 Hb_000003_020 Hb_139785_020--Hb_000003_020 Hb_002267_100 Hb_002267_100 Hb_139785_020--Hb_002267_100 Hb_002307_010 Hb_002307_010 Hb_139785_020--Hb_002307_010 Hb_004958_020--Hb_000003_020 Hb_002739_040 Hb_002739_040 Hb_004958_020--Hb_002739_040 Hb_000318_170 Hb_000318_170 Hb_004958_020--Hb_000318_170 Hb_001894_010 Hb_001894_010 Hb_004958_020--Hb_001894_010 Hb_078081_010 Hb_078081_010 Hb_004958_020--Hb_078081_010 Hb_006831_080 Hb_006831_080 Hb_001141_230--Hb_006831_080 Hb_001596_020 Hb_001596_020 Hb_001141_230--Hb_001596_020 Hb_004586_240 Hb_004586_240 Hb_001141_230--Hb_004586_240 Hb_001141_230--Hb_000003_020 Hb_028001_020 Hb_028001_020 Hb_001141_230--Hb_028001_020 Hb_001619_100 Hb_001619_100 Hb_004958_010--Hb_001619_100 Hb_001195_420 Hb_001195_420 Hb_004958_010--Hb_001195_420 Hb_102710_010 Hb_102710_010 Hb_004958_010--Hb_102710_010 Hb_159582_010 Hb_159582_010 Hb_004958_010--Hb_159582_010 Hb_023226_030 Hb_023226_030 Hb_004958_010--Hb_023226_030 Hb_001775_070 Hb_001775_070 Hb_004958_010--Hb_001775_070 Hb_003142_060 Hb_003142_060 Hb_000003_020--Hb_003142_060 Hb_000003_020--Hb_002739_040 Hb_004324_030 Hb_004324_030 Hb_000003_020--Hb_004324_030 Hb_004079_100 Hb_004079_100 Hb_000003_020--Hb_004079_100 Hb_000085_380 Hb_000085_380 Hb_000003_020--Hb_000085_380 Hb_003106_230 Hb_003106_230 Hb_000003_020--Hb_003106_230 Hb_002518_090 Hb_002518_090 Hb_002267_100--Hb_002518_090 Hb_002267_100--Hb_002739_040 Hb_000186_290 Hb_000186_290 Hb_002267_100--Hb_000186_290 Hb_002267_100--Hb_004958_020 Hb_000172_280 Hb_000172_280 Hb_002267_100--Hb_000172_280 Hb_001114_120 Hb_001114_120 Hb_002307_010--Hb_001114_120 Hb_001018_080 Hb_001018_080 Hb_002307_010--Hb_001018_080 Hb_011537_020 Hb_011537_020 Hb_002307_010--Hb_011537_020 Hb_000112_050 Hb_000112_050 Hb_002307_010--Hb_000112_050 Hb_000834_040 Hb_000834_040 Hb_002307_010--Hb_000834_040 Hb_003847_170 Hb_003847_170 Hb_002307_010--Hb_003847_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.399157 0.852554 1.15048 1.72032 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.412081 0.040512 0 1.71118 0.662393

CAGE analysis