Hb_006831_080

Information

Type -
Description -
Location Contig6831: 41808-42329
Sequence    

Annotation

kegg
ID rcu:RCOM_0820430
description Pectinesterase inhibitor, putative
nr
ID XP_012082217.1
description PREDICTED: uncharacterized protein LOC105642126 [Jatropha curcas]
swissprot
ID O49603
description Cell wall / vacuolar inhibitor of fructosidase 2 OS=Arabidopsis thaliana GN=C/VIF2 PE=1 SV=1
trembl
ID A0A067K1T4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16417 PE=4 SV=1
Gene Ontology
ID GO:0004857
description cell wall vacuolar inhibitor of fructosidase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53918: 41786-42548
cDNA
(Sanger)
(ID:Location)		 008_O07.ab1: 41838-42377 , 032_M23.ab1: 41786-42402 , 049_P14.ab1: 41787-42402

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006831_080 0.0 - - PREDICTED: uncharacterized protein LOC105642126 [Jatropha curcas]
2 Hb_001596_020 0.1011233962 - - hypothetical protein CICLE_v10014140mg [Citrus clementina]
3 Hb_001856_170 0.1030271484 - - PREDICTED: ABC transporter B family member 27 [Jatropha curcas]
4 Hb_000120_310 0.1189040522 - - Gibberellin 3-beta-dioxygenase, putative [Ricinus communis]
5 Hb_004586_240 0.1285302594 - - PREDICTED: serine/threonine-protein kinase-like protein At1g28390 [Jatropha curcas]
6 Hb_001141_230 0.1361157445 - - PREDICTED: uncharacterized protein LOC105632008 [Jatropha curcas]
7 Hb_001832_210 0.1371615498 - - PREDICTED: venom phosphodiesterase 2 [Jatropha curcas]
8 Hb_000085_380 0.1437538895 - - conserved hypothetical protein [Ricinus communis]
9 Hb_012727_010 0.1438123192 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
10 Hb_023226_030 0.1460210737 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Jatropha curcas]
11 Hb_001195_420 0.1528901214 - - PREDICTED: uncharacterized protein LOC105633774 isoform X4 [Jatropha curcas]
12 Hb_005694_180 0.157913167 - - PREDICTED: cytochrome b5 [Jatropha curcas]
13 Hb_001369_160 0.1579725467 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
14 Hb_002641_050 0.160196882 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 48 [Jatropha curcas]
15 Hb_006483_060 0.1611847907 - - PREDICTED: protein RALF-like 34 [Jatropha curcas]
16 Hb_010174_190 0.1646917708 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR11-like [Jatropha curcas]
17 Hb_000164_150 0.1647589635 - - serine/threonine-specific protein kinase, putative [Ricinus communis]
18 Hb_000000_110 0.1647611723 - - hypothetical protein CISIN_1g0027772mg, partial [Citrus sinensis]
19 Hb_000009_140 0.1648949706 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
20 Hb_148346_010 0.1653122735 - - -

Gene co-expression network

sample Hb_006831_080 Hb_006831_080 Hb_001596_020 Hb_001596_020 Hb_006831_080--Hb_001596_020 Hb_001856_170 Hb_001856_170 Hb_006831_080--Hb_001856_170 Hb_000120_310 Hb_000120_310 Hb_006831_080--Hb_000120_310 Hb_004586_240 Hb_004586_240 Hb_006831_080--Hb_004586_240 Hb_001141_230 Hb_001141_230 Hb_006831_080--Hb_001141_230 Hb_001832_210 Hb_001832_210 Hb_006831_080--Hb_001832_210 Hb_001596_020--Hb_001856_170 Hb_001596_020--Hb_000120_310 Hb_001369_160 Hb_001369_160 Hb_001596_020--Hb_001369_160 Hb_001596_020--Hb_004586_240 Hb_001178_080 Hb_001178_080 Hb_001596_020--Hb_001178_080 Hb_001856_170--Hb_000120_310 Hb_001856_170--Hb_004586_240 Hb_001856_170--Hb_001369_160 Hb_000009_140 Hb_000009_140 Hb_001856_170--Hb_000009_140 Hb_000120_310--Hb_001369_160 Hb_001488_280 Hb_001488_280 Hb_000120_310--Hb_001488_280 Hb_002833_020 Hb_002833_020 Hb_000120_310--Hb_002833_020 Hb_000120_310--Hb_004586_240 Hb_005504_030 Hb_005504_030 Hb_004586_240--Hb_005504_030 Hb_004586_240--Hb_000009_140 Hb_004586_240--Hb_001369_160 Hb_139785_020 Hb_139785_020 Hb_001141_230--Hb_139785_020 Hb_001141_230--Hb_001596_020 Hb_001141_230--Hb_004586_240 Hb_000003_020 Hb_000003_020 Hb_001141_230--Hb_000003_020 Hb_028001_020 Hb_028001_020 Hb_001141_230--Hb_028001_020 Hb_001071_060 Hb_001071_060 Hb_001832_210--Hb_001071_060 Hb_000000_110 Hb_000000_110 Hb_001832_210--Hb_000000_110 Hb_000197_230 Hb_000197_230 Hb_001832_210--Hb_000197_230 Hb_000997_340 Hb_000997_340 Hb_001832_210--Hb_000997_340 Hb_000220_080 Hb_000220_080 Hb_001832_210--Hb_000220_080 Hb_000085_380 Hb_000085_380 Hb_001832_210--Hb_000085_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
24.303 83.5396 67.4596 99.8006 4.44515 7.12463
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.13297 3.83518 1.17613 89.5149 23.9351

CAGE analysis