Hb_002046_130

Information

Type -
Description -
Location Contig2046: 149091-155376
Sequence    

Annotation

kegg
ID pop:POPTR_0018s12750g
description POPTRDRAFT_909659; hypothetical protein
nr
ID XP_012081203.1
description PREDICTED: UDP-sugar transporter sqv-7-like [Jatropha curcas]
swissprot
ID Q18779
description UDP-sugar transporter sqv-7 OS=Caenorhabditis elegans GN=sqv-7 PE=1 SV=1
trembl
ID A0A067KDE6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17037 PE=4 SV=1
Gene Ontology
ID GO:0016021
description udp-sugar transporter sqv-7-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002046_130 0.0 - - PREDICTED: UDP-sugar transporter sqv-7-like [Jatropha curcas]
2 Hb_000905_100 0.1234938409 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH130-like isoform X1 [Jatropha curcas]
3 Hb_001680_020 0.1316724055 desease resistance Gene Name: RPW8 Disease resistance protein ADR1, putative [Ricinus communis]
4 Hb_000809_130 0.1386942783 - - PREDICTED: peroxidase 10 isoform X3 [Jatropha curcas]
5 Hb_004115_010 0.1404767736 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG11 [Jatropha curcas]
6 Hb_004202_030 0.143900264 - - PREDICTED: uncharacterized protein LOC103449702 [Malus domestica]
7 Hb_029262_010 0.1455327139 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Populus euphratica]
8 Hb_006816_490 0.1456396249 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 [Jatropha curcas]
9 Hb_000002_370 0.1467248331 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
10 Hb_006501_080 0.149750496 - - PREDICTED: uncharacterized protein LOC105637775 [Jatropha curcas]
11 Hb_007313_030 0.1585763393 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Jatropha curcas]
12 Hb_000086_470 0.1586897145 - - hypothetical protein JCGZ_17645 [Jatropha curcas]
13 Hb_019973_010 0.1588456895 - - PREDICTED: probable methyltransferase PMT18 isoform X2 [Jatropha curcas]
14 Hb_000352_010 0.1600880527 - - PREDICTED: nudix hydrolase 13, mitochondrial [Jatropha curcas]
15 Hb_004567_070 0.1625607944 - - conserved hypothetical protein [Ricinus communis]
16 Hb_169893_010 0.162893062 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
17 Hb_004308_030 0.1641783304 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
18 Hb_003207_120 0.1657609543 - - molybdopterin cofactor sulfurase, putative [Ricinus communis]
19 Hb_000836_090 0.1660243811 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
20 Hb_000103_370 0.1661080658 - - PREDICTED: protein argonaute 10 [Jatropha curcas]

Gene co-expression network

sample Hb_002046_130 Hb_002046_130 Hb_000905_100 Hb_000905_100 Hb_002046_130--Hb_000905_100 Hb_001680_020 Hb_001680_020 Hb_002046_130--Hb_001680_020 Hb_000809_130 Hb_000809_130 Hb_002046_130--Hb_000809_130 Hb_004115_010 Hb_004115_010 Hb_002046_130--Hb_004115_010 Hb_004202_030 Hb_004202_030 Hb_002046_130--Hb_004202_030 Hb_029262_010 Hb_029262_010 Hb_002046_130--Hb_029262_010 Hb_000836_090 Hb_000836_090 Hb_000905_100--Hb_000836_090 Hb_000905_100--Hb_000809_130 Hb_000002_370 Hb_000002_370 Hb_000905_100--Hb_000002_370 Hb_002053_180 Hb_002053_180 Hb_000905_100--Hb_002053_180 Hb_000027_160 Hb_000027_160 Hb_000905_100--Hb_000027_160 Hb_033006_020 Hb_033006_020 Hb_000905_100--Hb_033006_020 Hb_006501_080 Hb_006501_080 Hb_001680_020--Hb_006501_080 Hb_006620_030 Hb_006620_030 Hb_001680_020--Hb_006620_030 Hb_016297_010 Hb_016297_010 Hb_001680_020--Hb_016297_010 Hb_007007_100 Hb_007007_100 Hb_001680_020--Hb_007007_100 Hb_000890_170 Hb_000890_170 Hb_001680_020--Hb_000890_170 Hb_027684_010 Hb_027684_010 Hb_001680_020--Hb_027684_010 Hb_004223_080 Hb_004223_080 Hb_000809_130--Hb_004223_080 Hb_000103_370 Hb_000103_370 Hb_000809_130--Hb_000103_370 Hb_006196_030 Hb_006196_030 Hb_000809_130--Hb_006196_030 Hb_000809_130--Hb_000002_370 Hb_002301_400 Hb_002301_400 Hb_000809_130--Hb_002301_400 Hb_019973_010 Hb_019973_010 Hb_004115_010--Hb_019973_010 Hb_000120_340 Hb_000120_340 Hb_004115_010--Hb_000120_340 Hb_007313_030 Hb_007313_030 Hb_004115_010--Hb_007313_030 Hb_000086_470 Hb_000086_470 Hb_004115_010--Hb_000086_470 Hb_002518_040 Hb_002518_040 Hb_004115_010--Hb_002518_040 Hb_005890_020 Hb_005890_020 Hb_004115_010--Hb_005890_020 Hb_003207_120 Hb_003207_120 Hb_004202_030--Hb_003207_120 Hb_004202_030--Hb_000086_470 Hb_004202_030--Hb_006501_080 Hb_004202_030--Hb_029262_010 Hb_004202_030--Hb_019973_010 Hb_004308_030 Hb_004308_030 Hb_004202_030--Hb_004308_030 Hb_029262_010--Hb_004308_030 Hb_000160_190 Hb_000160_190 Hb_029262_010--Hb_000160_190 Hb_029262_010--Hb_006501_080 Hb_003502_040 Hb_003502_040 Hb_029262_010--Hb_003502_040 Hb_000049_030 Hb_000049_030 Hb_029262_010--Hb_000049_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.152372 0.705486 0.38745 0 0.0574703
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0157484 0.24066

CAGE analysis