Hb_001688_090

Information

Type -
Description -
Location Contig1688: 96712-97737
Sequence    

Annotation

kegg
ID vvi:100232857
description ADH7; alcohol dehydrogenase 7
nr
ID NP_001268090.1
description alcohol dehydrogenase 7 [Vitis vinifera]
swissprot
ID -
description -
trembl
ID Q9M6B4
description Alcohol dehydrogenase 7 OS=Vitis vinifera GN=ADH7 PE=2 SV=1
Gene Ontology
ID GO:0008270
description alcohol dehydrogenase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001688_090 0.0 - - alcohol dehydrogenase 7 [Vitis vinifera]
2 Hb_001369_680 0.1478880447 - - PREDICTED: uncharacterized protein LOC105648582 [Jatropha curcas]
3 Hb_005951_010 0.1693785849 - - conserved hypothetical protein [Ricinus communis]
4 Hb_012799_010 0.1765517222 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 isoform X2 [Jatropha curcas]
5 Hb_003893_060 0.1935286967 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001396_270 0.2021999777 - - 4-coumarate--CoA ligase family protein [Populus trichocarpa]
7 Hb_005843_020 0.2035356416 - - multidrug resistance pump, putative [Ricinus communis]
8 Hb_061335_010 0.2076908069 - - hypothetical protein POPTR_0004s17300g [Populus trichocarpa]
9 Hb_004690_020 0.2108755935 - - PREDICTED: MLP-like protein 328 [Jatropha curcas]
10 Hb_122079_010 0.2172530066 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
11 Hb_001488_120 0.217745472 - - hypothetical protein JCGZ_19930 [Jatropha curcas]
12 Hb_004342_040 0.2178365732 - - PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like [Jatropha curcas]
13 Hb_157881_010 0.2179342313 - - ubiquitin-protein ligase, putative [Ricinus communis]
14 Hb_006012_030 0.2193164517 - - hypothetical protein POPTR_0008s02380g [Populus trichocarpa]
15 Hb_002534_140 0.2196350495 - - hypothetical protein JCGZ_11629 [Jatropha curcas]
16 Hb_010812_080 0.2204754394 - - PREDICTED: methylesterase 17 [Jatropha curcas]
17 Hb_000039_080 0.2210083764 - - cyclin d, putative [Ricinus communis]
18 Hb_005057_020 0.2232519021 - - PREDICTED: uncharacterized protein LOC105631610 [Jatropha curcas]
19 Hb_176760_010 0.2245230933 - - PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
20 Hb_008895_010 0.2245990289 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001688_090 Hb_001688_090 Hb_001369_680 Hb_001369_680 Hb_001688_090--Hb_001369_680 Hb_005951_010 Hb_005951_010 Hb_001688_090--Hb_005951_010 Hb_012799_010 Hb_012799_010 Hb_001688_090--Hb_012799_010 Hb_003893_060 Hb_003893_060 Hb_001688_090--Hb_003893_060 Hb_001396_270 Hb_001396_270 Hb_001688_090--Hb_001396_270 Hb_005843_020 Hb_005843_020 Hb_001688_090--Hb_005843_020 Hb_006663_110 Hb_006663_110 Hb_001369_680--Hb_006663_110 Hb_001369_680--Hb_001396_270 Hb_002374_540 Hb_002374_540 Hb_001369_680--Hb_002374_540 Hb_001369_680--Hb_005843_020 Hb_001369_680--Hb_012799_010 Hb_157881_010 Hb_157881_010 Hb_005951_010--Hb_157881_010 Hb_002534_140 Hb_002534_140 Hb_005951_010--Hb_002534_140 Hb_004342_040 Hb_004342_040 Hb_005951_010--Hb_004342_040 Hb_001976_070 Hb_001976_070 Hb_005951_010--Hb_001976_070 Hb_061335_010 Hb_061335_010 Hb_005951_010--Hb_061335_010 Hb_005057_020 Hb_005057_020 Hb_005951_010--Hb_005057_020 Hb_010812_080 Hb_010812_080 Hb_012799_010--Hb_010812_080 Hb_012545_020 Hb_012545_020 Hb_012799_010--Hb_012545_020 Hb_007227_020 Hb_007227_020 Hb_012799_010--Hb_007227_020 Hb_000679_180 Hb_000679_180 Hb_012799_010--Hb_000679_180 Hb_006663_120 Hb_006663_120 Hb_012799_010--Hb_006663_120 Hb_001002_010 Hb_001002_010 Hb_012799_010--Hb_001002_010 Hb_000236_210 Hb_000236_210 Hb_003893_060--Hb_000236_210 Hb_008406_050 Hb_008406_050 Hb_003893_060--Hb_008406_050 Hb_003464_100 Hb_003464_100 Hb_003893_060--Hb_003464_100 Hb_001269_100 Hb_001269_100 Hb_003893_060--Hb_001269_100 Hb_004732_070 Hb_004732_070 Hb_003893_060--Hb_004732_070 Hb_001246_080 Hb_001246_080 Hb_003893_060--Hb_001246_080 Hb_006012_030 Hb_006012_030 Hb_001396_270--Hb_006012_030 Hb_005914_220 Hb_005914_220 Hb_001396_270--Hb_005914_220 Hb_003988_020 Hb_003988_020 Hb_001396_270--Hb_003988_020 Hb_000042_120 Hb_000042_120 Hb_001396_270--Hb_000042_120 Hb_001396_270--Hb_002374_540 Hb_000270_590 Hb_000270_590 Hb_001396_270--Hb_000270_590 Hb_006816_240 Hb_006816_240 Hb_005843_020--Hb_006816_240 Hb_004690_020 Hb_004690_020 Hb_005843_020--Hb_004690_020 Hb_009662_040 Hb_009662_040 Hb_005843_020--Hb_009662_040 Hb_005116_090 Hb_005116_090 Hb_005843_020--Hb_005116_090 Hb_005843_020--Hb_003893_060 Hb_000635_020 Hb_000635_020 Hb_005843_020--Hb_000635_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.470017 0.106096 1.41203 4.96981 0.111208 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis