Hb_001246_080

Information

Type -
Description -
Location Contig1246: 49585-50121
Sequence    

Annotation

kegg
ID rcu:RCOM_0658820
description Pectinesterase inhibitor, putative
nr
ID XP_012083758.1
description PREDICTED: putative invertase inhibitor [Jatropha curcas]
swissprot
ID Q8GT41
description Putative invertase inhibitor OS=Platanus acerifolia PE=1 SV=1
trembl
ID A0A067JYE4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14678 PE=4 SV=1
Gene Ontology
ID GO:0004857
description invertase inhibitor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07434: 49745-50114
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001246_080 0.0 - - PREDICTED: putative invertase inhibitor [Jatropha curcas]
2 Hb_003464_100 0.1269489521 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
3 Hb_003050_210 0.1306260298 - - PREDICTED: cytochrome b561 domain-containing protein At4g18260-like [Populus euphratica]
4 Hb_000152_730 0.1355305065 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002235_330 0.137133021 - - PREDICTED: expansin-A1 isoform X1 [Jatropha curcas]
6 Hb_097213_010 0.1426750141 - - PREDICTED: cytochrome P450 714C2-like [Populus euphratica]
7 Hb_000175_600 0.1454675043 - - PREDICTED: TATA-binding protein-associated factor 2N isoform X2 [Jatropha curcas]
8 Hb_000270_590 0.1480302751 - - hypothetical protein POPTR_0012s07820g [Populus trichocarpa]
9 Hb_002925_040 0.1557564458 desease resistance Gene Name: TIR hypothetical protein JCGZ_01545 [Jatropha curcas]
10 Hb_002326_090 0.1575630552 - - amino acid transporter, putative [Ricinus communis]
11 Hb_004102_180 0.1596995228 - - zinc finger family protein [Populus trichocarpa]
12 Hb_006012_030 0.1603778477 - - hypothetical protein POPTR_0008s02380g [Populus trichocarpa]
13 Hb_011218_010 0.1611537219 - - PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9 [Jatropha curcas]
14 Hb_009111_060 0.1640879301 - - PREDICTED: sodium transporter HKT1-like [Jatropha curcas]
15 Hb_007292_060 0.164500876 - - PREDICTED: uncharacterized protein LOC105632853 [Jatropha curcas]
16 Hb_000236_210 0.164827152 - - hypothetical protein JCGZ_01083 [Jatropha curcas]
17 Hb_006603_010 0.1680739078 - - neutral alpha-glucosidase ab precursor, putative [Ricinus communis]
18 Hb_015175_060 0.1683711771 - - copper transport protein atox1, putative [Ricinus communis]
19 Hb_000366_070 0.1712598044 - - PREDICTED: protein NRT1/ PTR FAMILY 6.2 [Jatropha curcas]
20 Hb_007292_020 0.1722433462 - - Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus communis]

Gene co-expression network

sample Hb_001246_080 Hb_001246_080 Hb_003464_100 Hb_003464_100 Hb_001246_080--Hb_003464_100 Hb_003050_210 Hb_003050_210 Hb_001246_080--Hb_003050_210 Hb_000152_730 Hb_000152_730 Hb_001246_080--Hb_000152_730 Hb_002235_330 Hb_002235_330 Hb_001246_080--Hb_002235_330 Hb_097213_010 Hb_097213_010 Hb_001246_080--Hb_097213_010 Hb_000175_600 Hb_000175_600 Hb_001246_080--Hb_000175_600 Hb_003464_100--Hb_000175_600 Hb_004102_180 Hb_004102_180 Hb_003464_100--Hb_004102_180 Hb_069384_010 Hb_069384_010 Hb_003464_100--Hb_069384_010 Hb_002326_090 Hb_002326_090 Hb_003464_100--Hb_002326_090 Hb_000236_210 Hb_000236_210 Hb_003464_100--Hb_000236_210 Hb_011218_010 Hb_011218_010 Hb_003464_100--Hb_011218_010 Hb_000905_130 Hb_000905_130 Hb_003050_210--Hb_000905_130 Hb_000270_590 Hb_000270_590 Hb_003050_210--Hb_000270_590 Hb_006603_010 Hb_006603_010 Hb_003050_210--Hb_006603_010 Hb_006846_050 Hb_006846_050 Hb_003050_210--Hb_006846_050 Hb_000375_210 Hb_000375_210 Hb_003050_210--Hb_000375_210 Hb_002701_200 Hb_002701_200 Hb_003050_210--Hb_002701_200 Hb_007292_060 Hb_007292_060 Hb_000152_730--Hb_007292_060 Hb_000487_130 Hb_000487_130 Hb_000152_730--Hb_000487_130 Hb_000152_730--Hb_002326_090 Hb_090210_010 Hb_090210_010 Hb_000152_730--Hb_090210_010 Hb_000152_730--Hb_011218_010 Hb_051900_020 Hb_051900_020 Hb_002235_330--Hb_051900_020 Hb_160479_010 Hb_160479_010 Hb_002235_330--Hb_160479_010 Hb_010068_010 Hb_010068_010 Hb_002235_330--Hb_010068_010 Hb_033691_010 Hb_033691_010 Hb_002235_330--Hb_033691_010 Hb_000566_060 Hb_000566_060 Hb_002235_330--Hb_000566_060 Hb_004317_020 Hb_004317_020 Hb_002235_330--Hb_004317_020 Hb_010608_040 Hb_010608_040 Hb_097213_010--Hb_010608_040 Hb_000392_080 Hb_000392_080 Hb_097213_010--Hb_000392_080 Hb_012799_010 Hb_012799_010 Hb_097213_010--Hb_012799_010 Hb_097213_010--Hb_000175_600 Hb_097213_010--Hb_002326_090 Hb_000099_110 Hb_000099_110 Hb_097213_010--Hb_000099_110 Hb_000175_600--Hb_004102_180 Hb_000175_600--Hb_002326_090 Hb_000175_600--Hb_007292_060 Hb_136944_010 Hb_136944_010 Hb_000175_600--Hb_136944_010 Hb_000175_600--Hb_011218_010 Hb_000964_120 Hb_000964_120 Hb_000175_600--Hb_000964_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.10258 0.184208 1.82751 14.6581 0.251463 0.0458964
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.188034 0.16148 0.271935 0.178402

CAGE analysis