Hb_136944_010

Information

Type -
Description -
Location Contig136944: 1574-2155
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa000927mg
description hypothetical protein
nr
ID KDP39742.1
description hypothetical protein JCGZ_02762 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUF6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02762 PE=3 SV=1
Gene Ontology
ID GO:0009507
description neutral alpha-glucosidase c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_136944_010 0.0 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
2 Hb_000175_600 0.0753721274 - - PREDICTED: TATA-binding protein-associated factor 2N isoform X2 [Jatropha curcas]
3 Hb_007292_060 0.0830232444 - - PREDICTED: uncharacterized protein LOC105632853 [Jatropha curcas]
4 Hb_116349_080 0.0865218787 - - Nectarin-1 precursor, putative [Ricinus communis]
5 Hb_000964_120 0.0903610709 - - DNA-damage-inducible protein f, putative [Ricinus communis]
6 Hb_004102_180 0.0906074665 - - zinc finger family protein [Populus trichocarpa]
7 Hb_000731_180 0.0923321039 - - hypothetical protein POPTR_0004s01820g [Populus trichocarpa]
8 Hb_003197_050 0.0938609059 - - hypothetical protein JCGZ_04279 [Jatropha curcas]
9 Hb_011218_010 0.0960799662 - - PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9 [Jatropha curcas]
10 Hb_009158_010 0.0974851304 - - PREDICTED: cytochrome P450 78A9 [Jatropha curcas]
11 Hb_008021_080 0.0976641136 - - PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 1-like [Nicotiana sylvestris]
12 Hb_001433_230 0.0980932361 - - PREDICTED: kinesin-4-like [Jatropha curcas]
13 Hb_090210_010 0.0998497855 - - neutral alpha-glucosidase ab precursor, putative [Ricinus communis]
14 Hb_022250_140 0.0998786754 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
15 Hb_006970_180 0.1010337094 - - PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Jatropha curcas]
16 Hb_000155_030 0.1015340499 - - PREDICTED: uncharacterized protein LOC105649591 [Jatropha curcas]
17 Hb_003598_050 0.1016471922 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
18 Hb_006603_010 0.1026044398 - - neutral alpha-glucosidase ab precursor, putative [Ricinus communis]
19 Hb_004732_080 0.1030567505 - - PREDICTED: germin-like protein subfamily 3 member 2 [Populus euphratica]
20 Hb_006816_060 0.1042104846 - - PREDICTED: phospholipid-metabolizing enzyme A-C1-like [Jatropha curcas]

Gene co-expression network

sample Hb_136944_010 Hb_136944_010 Hb_000175_600 Hb_000175_600 Hb_136944_010--Hb_000175_600 Hb_007292_060 Hb_007292_060 Hb_136944_010--Hb_007292_060 Hb_116349_080 Hb_116349_080 Hb_136944_010--Hb_116349_080 Hb_000964_120 Hb_000964_120 Hb_136944_010--Hb_000964_120 Hb_004102_180 Hb_004102_180 Hb_136944_010--Hb_004102_180 Hb_000731_180 Hb_000731_180 Hb_136944_010--Hb_000731_180 Hb_000175_600--Hb_004102_180 Hb_002326_090 Hb_002326_090 Hb_000175_600--Hb_002326_090 Hb_000175_600--Hb_007292_060 Hb_011218_010 Hb_011218_010 Hb_000175_600--Hb_011218_010 Hb_000175_600--Hb_000964_120 Hb_007292_060--Hb_000964_120 Hb_007292_060--Hb_002326_090 Hb_090210_010 Hb_090210_010 Hb_007292_060--Hb_090210_010 Hb_007292_060--Hb_004102_180 Hb_007292_060--Hb_011218_010 Hb_003197_050 Hb_003197_050 Hb_116349_080--Hb_003197_050 Hb_000155_030 Hb_000155_030 Hb_116349_080--Hb_000155_030 Hb_025557_090 Hb_025557_090 Hb_116349_080--Hb_025557_090 Hb_009158_010 Hb_009158_010 Hb_116349_080--Hb_009158_010 Hb_000230_220 Hb_000230_220 Hb_116349_080--Hb_000230_220 Hb_003598_050 Hb_003598_050 Hb_116349_080--Hb_003598_050 Hb_000964_120--Hb_002326_090 Hb_001006_300 Hb_001006_300 Hb_000964_120--Hb_001006_300 Hb_000964_120--Hb_003197_050 Hb_000964_120--Hb_011218_010 Hb_000964_120--Hb_090210_010 Hb_069384_010 Hb_069384_010 Hb_004102_180--Hb_069384_010 Hb_004102_180--Hb_011218_010 Hb_007290_010 Hb_007290_010 Hb_004102_180--Hb_007290_010 Hb_004102_180--Hb_002326_090 Hb_004732_080 Hb_004732_080 Hb_000731_180--Hb_004732_080 Hb_000731_180--Hb_090210_010 Hb_011224_030 Hb_011224_030 Hb_000731_180--Hb_011224_030 Hb_007007_140 Hb_007007_140 Hb_000731_180--Hb_007007_140 Hb_024066_020 Hb_024066_020 Hb_000731_180--Hb_024066_020 Hb_002308_040 Hb_002308_040 Hb_000731_180--Hb_002308_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.167616 5.28682 28.7887 222.645 1.13544 1.84861
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.530408 16.7418

CAGE analysis