Hb_001300_260

Information

Type -
Description -
Location Contig1300: 207580-212371
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001300_260 0.0 - - -
2 Hb_000920_370 0.2556067601 - - hypothetical protein JCGZ_24527 [Jatropha curcas]
3 Hb_161785_010 0.2823224214 - - PREDICTED: uncharacterized protein LOC105785094 [Gossypium raimondii]
4 Hb_007305_030 0.288037368 - - serine-threonine protein kinase, putative [Ricinus communis]
5 Hb_001449_050 0.3017523388 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001158_190 0.3208544671 - - PREDICTED: bidirectional sugar transporter SWEET10-like [Jatropha curcas]
7 Hb_032264_090 0.3329001222 - - hypothetical protein JCGZ_02512 [Jatropha curcas]
8 Hb_030458_010 0.3380055784 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_002046_070 0.3417492566 transcription factor TF Family: AUX/IAA PREDICTED: auxin-induced protein 22D-like isoform X1 [Populus euphratica]
10 Hb_006907_080 0.3441895329 - - PREDICTED: RPM1-interacting protein 4-like [Jatropha curcas]
11 Hb_005700_010 0.3461054013 - - PREDICTED: uncharacterized protein LOC104898079 [Beta vulgaris subsp. vulgaris]
12 Hb_000369_020 0.3465371354 - - PREDICTED: probable fructokinase-7 [Jatropha curcas]
13 Hb_009233_030 0.3487526928 - - protein binding protein, putative [Ricinus communis]
14 Hb_111039_010 0.3504844315 - - -
15 Hb_001477_150 0.3506030677 - - o-methyltransferase, putative [Ricinus communis]
16 Hb_000676_270 0.3518494587 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 1 [Jatropha curcas]
17 Hb_000418_080 0.3535988331 - - PREDICTED: uncharacterized protein LOC105124652 [Populus euphratica]
18 Hb_140049_010 0.35410344 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105632009 [Jatropha curcas]
19 Hb_006570_050 0.3566139633 - - PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]
20 Hb_000483_480 0.357843884 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001300_260 Hb_001300_260 Hb_000920_370 Hb_000920_370 Hb_001300_260--Hb_000920_370 Hb_161785_010 Hb_161785_010 Hb_001300_260--Hb_161785_010 Hb_007305_030 Hb_007305_030 Hb_001300_260--Hb_007305_030 Hb_001449_050 Hb_001449_050 Hb_001300_260--Hb_001449_050 Hb_001158_190 Hb_001158_190 Hb_001300_260--Hb_001158_190 Hb_032264_090 Hb_032264_090 Hb_001300_260--Hb_032264_090 Hb_001959_130 Hb_001959_130 Hb_000920_370--Hb_001959_130 Hb_000920_370--Hb_007305_030 Hb_001123_210 Hb_001123_210 Hb_000920_370--Hb_001123_210 Hb_000920_370--Hb_001158_190 Hb_001516_020 Hb_001516_020 Hb_000920_370--Hb_001516_020 Hb_111039_010 Hb_111039_010 Hb_161785_010--Hb_111039_010 Hb_017134_010 Hb_017134_010 Hb_161785_010--Hb_017134_010 Hb_004291_010 Hb_004291_010 Hb_161785_010--Hb_004291_010 Hb_000676_270 Hb_000676_270 Hb_161785_010--Hb_000676_270 Hb_001863_440 Hb_001863_440 Hb_161785_010--Hb_001863_440 Hb_002045_180 Hb_002045_180 Hb_007305_030--Hb_002045_180 Hb_000369_020 Hb_000369_020 Hb_007305_030--Hb_000369_020 Hb_000141_020 Hb_000141_020 Hb_007305_030--Hb_000141_020 Hb_000099_130 Hb_000099_130 Hb_007305_030--Hb_000099_130 Hb_010931_050 Hb_010931_050 Hb_007305_030--Hb_010931_050 Hb_001314_020 Hb_001314_020 Hb_007305_030--Hb_001314_020 Hb_000343_180 Hb_000343_180 Hb_001449_050--Hb_000343_180 Hb_012052_070 Hb_012052_070 Hb_001449_050--Hb_012052_070 Hb_089160_010 Hb_089160_010 Hb_001449_050--Hb_089160_010 Hb_005147_010 Hb_005147_010 Hb_001449_050--Hb_005147_010 Hb_140049_010 Hb_140049_010 Hb_001449_050--Hb_140049_010 Hb_023344_080 Hb_023344_080 Hb_001449_050--Hb_023344_080 Hb_001158_190--Hb_010931_050 Hb_000749_240 Hb_000749_240 Hb_001158_190--Hb_000749_240 Hb_001511_140 Hb_001511_140 Hb_001158_190--Hb_001511_140 Hb_088538_010 Hb_088538_010 Hb_001158_190--Hb_088538_010 Hb_000788_080 Hb_000788_080 Hb_001158_190--Hb_000788_080 Hb_000261_450 Hb_000261_450 Hb_001158_190--Hb_000261_450 Hb_000008_110 Hb_000008_110 Hb_032264_090--Hb_000008_110 Hb_000210_090 Hb_000210_090 Hb_032264_090--Hb_000210_090 Hb_002110_240 Hb_002110_240 Hb_032264_090--Hb_002110_240 Hb_008173_030 Hb_008173_030 Hb_032264_090--Hb_008173_030 Hb_000638_210 Hb_000638_210 Hb_032264_090--Hb_000638_210 Hb_000672_150 Hb_000672_150 Hb_032264_090--Hb_000672_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0694832 0 0.0252215 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0635843 0.0499991 0.0908066 0 0

CAGE analysis