Hb_001158_190

Information

Type -
Description -
Location Contig1158: 129144-130991
Sequence    

Annotation

kegg
ID rcu:RCOM_1504900
description hypothetical protein
nr
ID XP_012090633.1
description PREDICTED: bidirectional sugar transporter SWEET10-like [Jatropha curcas]
swissprot
ID Q8LFH5
description Bidirectional sugar transporter SWEET8 OS=Arabidopsis thaliana GN=SWEET8 PE=2 SV=1
trembl
ID A0A067JIB7
description Sugar transporter SWEET OS=Jatropha curcas GN=JCGZ_26404 PE=3 SV=1
Gene Ontology
ID GO:0005886
description bidirectional sugar transporter sweet10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04757: 129172-130928
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001158_190 0.0 - - PREDICTED: bidirectional sugar transporter SWEET10-like [Jatropha curcas]
2 Hb_010931_050 0.1786759601 transcription factor TF Family: Jumonji PREDICTED: lysine-specific demethylase JMJ25-like [Jatropha curcas]
3 Hb_000749_240 0.1848232189 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001511_140 0.192451964 - - PREDICTED: RING-H2 finger protein ATL66 [Jatropha curcas]
5 Hb_088538_010 0.2077020135 - - hypothetical protein JCGZ_12177 [Jatropha curcas]
6 Hb_000788_080 0.2081782342 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
7 Hb_000261_450 0.210215577 - - Pectinesterase U1 precursor, putative [Ricinus communis]
8 Hb_000363_150 0.2107357306 - - hypothetical protein POPTR_0011s09040g [Populus trichocarpa]
9 Hb_005000_160 0.2110546826 - - PREDICTED: uncharacterized protein LOC105637882 [Jatropha curcas]
10 Hb_017134_010 0.2138185167 - - HEV1.2 [Hevea brasiliensis]
11 Hb_000784_030 0.2167261392 - - neutral/alkaline invertase 2 [Hevea brasiliensis]
12 Hb_003371_100 0.2176710696 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
13 Hb_001959_130 0.2183249353 - - transporter, putative [Ricinus communis]
14 Hb_012053_040 0.2196400402 - - PREDICTED: putative phospholipid:diacylglycerol acyltransferase 2 [Jatropha curcas]
15 Hb_000103_110 0.2198405835 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Jatropha curcas]
16 Hb_007305_030 0.2199779437 - - serine-threonine protein kinase, putative [Ricinus communis]
17 Hb_002450_070 0.2215485451 - - (S)-N-methylcoclaurine 3'-hydroxylase isozyme, putative [Ricinus communis]
18 Hb_001741_040 0.2249735227 rubber biosynthesis Gene Name: REF3 REF-like stress related protein 1 [Hevea brasiliensis]
19 Hb_000613_160 0.2274252614 - - coated vesicle membrane protein, putative [Ricinus communis]
20 Hb_001369_450 0.231614388 - - trehalose-6-phosphate synthase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001158_190 Hb_001158_190 Hb_010931_050 Hb_010931_050 Hb_001158_190--Hb_010931_050 Hb_000749_240 Hb_000749_240 Hb_001158_190--Hb_000749_240 Hb_001511_140 Hb_001511_140 Hb_001158_190--Hb_001511_140 Hb_088538_010 Hb_088538_010 Hb_001158_190--Hb_088538_010 Hb_000788_080 Hb_000788_080 Hb_001158_190--Hb_000788_080 Hb_000261_450 Hb_000261_450 Hb_001158_190--Hb_000261_450 Hb_000836_130 Hb_000836_130 Hb_010931_050--Hb_000836_130 Hb_000784_030 Hb_000784_030 Hb_010931_050--Hb_000784_030 Hb_000141_030 Hb_000141_030 Hb_010931_050--Hb_000141_030 Hb_001357_120 Hb_001357_120 Hb_010931_050--Hb_001357_120 Hb_000084_320 Hb_000084_320 Hb_010931_050--Hb_000084_320 Hb_000963_140 Hb_000963_140 Hb_010931_050--Hb_000963_140 Hb_009838_040 Hb_009838_040 Hb_000749_240--Hb_009838_040 Hb_017134_010 Hb_017134_010 Hb_000749_240--Hb_017134_010 Hb_000115_050 Hb_000115_050 Hb_000749_240--Hb_000115_050 Hb_005000_160 Hb_005000_160 Hb_000749_240--Hb_005000_160 Hb_001579_140 Hb_001579_140 Hb_000749_240--Hb_001579_140 Hb_001511_140--Hb_000788_080 Hb_001776_170 Hb_001776_170 Hb_001511_140--Hb_001776_170 Hb_000979_250 Hb_000979_250 Hb_001511_140--Hb_000979_250 Hb_012053_040 Hb_012053_040 Hb_001511_140--Hb_012053_040 Hb_002759_240 Hb_002759_240 Hb_001511_140--Hb_002759_240 Hb_000592_060 Hb_000592_060 Hb_001511_140--Hb_000592_060 Hb_148209_060 Hb_148209_060 Hb_088538_010--Hb_148209_060 Hb_000545_170 Hb_000545_170 Hb_088538_010--Hb_000545_170 Hb_002450_070 Hb_002450_070 Hb_088538_010--Hb_002450_070 Hb_004218_210 Hb_004218_210 Hb_088538_010--Hb_004218_210 Hb_000453_300 Hb_000453_300 Hb_088538_010--Hb_000453_300 Hb_002045_200 Hb_002045_200 Hb_088538_010--Hb_002045_200 Hb_003095_070 Hb_003095_070 Hb_000788_080--Hb_003095_070 Hb_000788_080--Hb_005000_160 Hb_000613_160 Hb_000613_160 Hb_000788_080--Hb_000613_160 Hb_001159_200 Hb_001159_200 Hb_000788_080--Hb_001159_200 Hb_000788_080--Hb_009838_040 Hb_000261_450--Hb_001511_140 Hb_000261_450--Hb_003095_070 Hb_000261_450--Hb_000788_080 Hb_000261_450--Hb_002450_070 Hb_001258_140 Hb_001258_140 Hb_000261_450--Hb_001258_140 Hb_000281_230 Hb_000281_230 Hb_000261_450--Hb_000281_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.62222 14.554 2.52351 5.38055 2.37015 1.11843
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
85.9561 65.9939 102.329 4.12802 6.4321

CAGE analysis