Hb_001357_120

Information

Type -
Description -
Location Contig1357: 86408-90524
Sequence    

Annotation

kegg
ID rcu:RCOM_0753070
description ubiquitin-activating enzyme E1, putative
nr
ID XP_002529467.1
description ubiquitin-activating enzyme E1, putative [Ricinus communis]
swissprot
ID Q9ZNW0
description Adenylyltransferase and sulfurtransferase MOCS3 OS=Arabidopsis thaliana GN=MOCS3 PE=2 SV=1
trembl
ID B9STZ8
description Adenylyltransferase and sulfurtransferase MOCS3 OS=Ricinus communis GN=MOCS3 PE=3 SV=1
Gene Ontology
ID GO:0005829
description adenylyltransferase and sulfurtransferase mocs3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09917: 86405-90478
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001357_120 0.0 - - ubiquitin-activating enzyme E1, putative [Ricinus communis]
2 Hb_001519_030 0.1131324351 - - PREDICTED: protein trichome birefringence-like 12 isoform X1 [Jatropha curcas]
3 Hb_000836_130 0.1178616737 - - PREDICTED: uncharacterized protein LOC105642953 isoform X2 [Jatropha curcas]
4 Hb_002260_030 0.1182937237 - - PREDICTED: putative glutamine amidotransferase YLR126C [Jatropha curcas]
5 Hb_000424_210 0.1184119111 - - PREDICTED: uncharacterized protein LOC105638063 isoform X1 [Jatropha curcas]
6 Hb_000196_080 0.1223926247 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH79-like isoform X1 [Jatropha curcas]
7 Hb_001218_040 0.122741943 - - Mitochondrial substrate carrier family protein [Theobroma cacao]
8 Hb_000125_210 0.1255987237 - - PREDICTED: electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial [Jatropha curcas]
9 Hb_002774_050 0.1256089688 - - PREDICTED: uncharacterized protein LOC105630601 [Jatropha curcas]
10 Hb_000175_030 0.1285379221 - - Signal recognition particle, SRP54 subunit protein [Theobroma cacao]
11 Hb_001279_340 0.1316038227 - - glycerol-3-phosphate dehydrogenase [Jatropha curcas]
12 Hb_005656_100 0.1349881865 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003581_260 0.13610532 - - PREDICTED: vacuolar protein sorting-associated protein 29-like [Jatropha curcas]
14 Hb_000099_130 0.1363172605 - - PREDICTED: uncharacterized protein LOC105645728 [Jatropha curcas]
15 Hb_003462_120 0.1367382206 - - Acidic endochitinase [Theobroma cacao]
16 Hb_008948_100 0.1369351152 - - PREDICTED: SPX domain-containing protein 1-like [Jatropha curcas]
17 Hb_000083_090 0.1385351254 - - immunophilin, putative [Ricinus communis]
18 Hb_002600_040 0.1394065684 - - PREDICTED: probable transmembrane ascorbate ferrireductase 2 [Jatropha curcas]
19 Hb_001904_090 0.1395108882 - - PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC [Jatropha curcas]
20 Hb_021443_080 0.1410243706 - - PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Jatropha curcas]

Gene co-expression network

sample Hb_001357_120 Hb_001357_120 Hb_001519_030 Hb_001519_030 Hb_001357_120--Hb_001519_030 Hb_000836_130 Hb_000836_130 Hb_001357_120--Hb_000836_130 Hb_002260_030 Hb_002260_030 Hb_001357_120--Hb_002260_030 Hb_000424_210 Hb_000424_210 Hb_001357_120--Hb_000424_210 Hb_000196_080 Hb_000196_080 Hb_001357_120--Hb_000196_080 Hb_001218_040 Hb_001218_040 Hb_001357_120--Hb_001218_040 Hb_001481_140 Hb_001481_140 Hb_001519_030--Hb_001481_140 Hb_006569_100 Hb_006569_100 Hb_001519_030--Hb_006569_100 Hb_001005_080 Hb_001005_080 Hb_001519_030--Hb_001005_080 Hb_005527_040 Hb_005527_040 Hb_001519_030--Hb_005527_040 Hb_000817_030 Hb_000817_030 Hb_001519_030--Hb_000817_030 Hb_001904_090 Hb_001904_090 Hb_001519_030--Hb_001904_090 Hb_000784_030 Hb_000784_030 Hb_000836_130--Hb_000784_030 Hb_000084_320 Hb_000084_320 Hb_000836_130--Hb_000084_320 Hb_001135_210 Hb_001135_210 Hb_000836_130--Hb_001135_210 Hb_003581_220 Hb_003581_220 Hb_000836_130--Hb_003581_220 Hb_000099_130 Hb_000099_130 Hb_000836_130--Hb_000099_130 Hb_002774_050 Hb_002774_050 Hb_002260_030--Hb_002774_050 Hb_000914_170 Hb_000914_170 Hb_002260_030--Hb_000914_170 Hb_008948_100 Hb_008948_100 Hb_002260_030--Hb_008948_100 Hb_000175_030 Hb_000175_030 Hb_002260_030--Hb_000175_030 Hb_000705_290 Hb_000705_290 Hb_002260_030--Hb_000705_290 Hb_002659_040 Hb_002659_040 Hb_000424_210--Hb_002659_040 Hb_000424_210--Hb_000196_080 Hb_000424_210--Hb_001519_030 Hb_093458_050 Hb_093458_050 Hb_000424_210--Hb_093458_050 Hb_000162_140 Hb_000162_140 Hb_000424_210--Hb_000162_140 Hb_000424_210--Hb_000099_130 Hb_000125_030 Hb_000125_030 Hb_000196_080--Hb_000125_030 Hb_003504_020 Hb_003504_020 Hb_000196_080--Hb_003504_020 Hb_000196_080--Hb_000162_140 Hb_003581_260 Hb_003581_260 Hb_000196_080--Hb_003581_260 Hb_007382_150 Hb_007382_150 Hb_000196_080--Hb_007382_150 Hb_001396_100 Hb_001396_100 Hb_001218_040--Hb_001396_100 Hb_000224_140 Hb_000224_140 Hb_001218_040--Hb_000224_140 Hb_001218_040--Hb_001904_090 Hb_003349_080 Hb_003349_080 Hb_001218_040--Hb_003349_080 Hb_001616_030 Hb_001616_030 Hb_001218_040--Hb_001616_030 Hb_000680_140 Hb_000680_140 Hb_001218_040--Hb_000680_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.99231 1.96837 2.89265 3.04708 1.38296 1.98926
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.0299 9.75332 14.5862 4.7802 4.31459

CAGE analysis