Hb_012052_070

Information

Type -
Description -
Location Contig12052: 44465-44851
Sequence    

Annotation

kegg
ID pop:POPTR_0018s10200g
description POPTRDRAFT_779447; hypothetical protein
nr
ID XP_012074067.1
description PREDICTED: uncharacterized protein LOC105635597 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KN30
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08677 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012052_070 0.0 - - PREDICTED: uncharacterized protein LOC105635597 [Jatropha curcas]
2 Hb_000099_070 0.2109214465 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
3 Hb_001449_050 0.2313725272 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002267_080 0.2320504754 - - PREDICTED: uncharacterized protein LOC105635094 [Jatropha curcas]
5 Hb_000948_080 0.2356119324 - - PREDICTED: uncharacterized protein LOC105634692 [Jatropha curcas]
6 Hb_005686_050 0.2384944292 - - PREDICTED: probable tyrosine-protein phosphatase At1g05000 [Jatropha curcas]
7 Hb_001488_370 0.2401673948 - - Esterase PIR7B, putative [Ricinus communis]
8 Hb_000304_030 0.2419586938 - - PREDICTED: seed maturation protein PM36 [Jatropha curcas]
9 Hb_012545_050 0.2431269903 - - PREDICTED: serine carboxypeptidase II-3-like [Jatropha curcas]
10 Hb_001049_020 0.2441448363 - - conserved hypothetical protein [Ricinus communis]
11 Hb_026687_010 0.2447398583 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Eucalyptus grandis]
12 Hb_003777_050 0.244951111 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105629120 [Jatropha curcas]
13 Hb_012760_070 0.2455545415 - - protein phosphatase 2c, putative [Ricinus communis]
14 Hb_001565_080 0.2462329623 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM17-2-like [Jatropha curcas]
15 Hb_000009_450 0.2464891687 - - PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Jatropha curcas]
16 Hb_010050_050 0.2465730365 - - PREDICTED: piezo-type mechanosensitive ion channel homolog isoform X2 [Jatropha curcas]
17 Hb_000215_060 0.2475981532 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM17-2-like [Jatropha curcas]
18 Hb_003972_080 0.2484411759 - - PREDICTED: probable 6-phosphogluconolactonase 1 [Jatropha curcas]
19 Hb_001437_130 0.2489755874 - - hypothetical protein F383_15788 [Gossypium arboreum]
20 Hb_008772_010 0.2499732335 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_012052_070 Hb_012052_070 Hb_000099_070 Hb_000099_070 Hb_012052_070--Hb_000099_070 Hb_001449_050 Hb_001449_050 Hb_012052_070--Hb_001449_050 Hb_002267_080 Hb_002267_080 Hb_012052_070--Hb_002267_080 Hb_000948_080 Hb_000948_080 Hb_012052_070--Hb_000948_080 Hb_005686_050 Hb_005686_050 Hb_012052_070--Hb_005686_050 Hb_001488_370 Hb_001488_370 Hb_012052_070--Hb_001488_370 Hb_000116_040 Hb_000116_040 Hb_000099_070--Hb_000116_040 Hb_008772_010 Hb_008772_010 Hb_000099_070--Hb_008772_010 Hb_006006_050 Hb_006006_050 Hb_000099_070--Hb_006006_050 Hb_002235_080 Hb_002235_080 Hb_000099_070--Hb_002235_080 Hb_007017_010 Hb_007017_010 Hb_000099_070--Hb_007017_010 Hb_011236_010 Hb_011236_010 Hb_000099_070--Hb_011236_010 Hb_000343_180 Hb_000343_180 Hb_001449_050--Hb_000343_180 Hb_089160_010 Hb_089160_010 Hb_001449_050--Hb_089160_010 Hb_005147_010 Hb_005147_010 Hb_001449_050--Hb_005147_010 Hb_140049_010 Hb_140049_010 Hb_001449_050--Hb_140049_010 Hb_023344_080 Hb_023344_080 Hb_001449_050--Hb_023344_080 Hb_000694_060 Hb_000694_060 Hb_002267_080--Hb_000694_060 Hb_002374_380 Hb_002374_380 Hb_002267_080--Hb_002374_380 Hb_002267_080--Hb_007017_010 Hb_000304_030 Hb_000304_030 Hb_002267_080--Hb_000304_030 Hb_002267_080--Hb_000948_080 Hb_004543_040 Hb_004543_040 Hb_002267_080--Hb_004543_040 Hb_021888_050 Hb_021888_050 Hb_000948_080--Hb_021888_050 Hb_000975_360 Hb_000975_360 Hb_000948_080--Hb_000975_360 Hb_000402_210 Hb_000402_210 Hb_000948_080--Hb_000402_210 Hb_110560_010 Hb_110560_010 Hb_000948_080--Hb_110560_010 Hb_000948_080--Hb_002374_380 Hb_028487_020 Hb_028487_020 Hb_000948_080--Hb_028487_020 Hb_000009_450 Hb_000009_450 Hb_005686_050--Hb_000009_450 Hb_008566_050 Hb_008566_050 Hb_005686_050--Hb_008566_050 Hb_005686_050--Hb_110560_010 Hb_012760_070 Hb_012760_070 Hb_005686_050--Hb_012760_070 Hb_005545_100 Hb_005545_100 Hb_005686_050--Hb_005545_100 Hb_004375_150 Hb_004375_150 Hb_005686_050--Hb_004375_150 Hb_012545_050 Hb_012545_050 Hb_001488_370--Hb_012545_050 Hb_012053_050 Hb_012053_050 Hb_001488_370--Hb_012053_050 Hb_001369_600 Hb_001369_600 Hb_001488_370--Hb_001369_600 Hb_000997_190 Hb_000997_190 Hb_001488_370--Hb_000997_190 Hb_001437_130 Hb_001437_130 Hb_001488_370--Hb_001437_130 Hb_001776_170 Hb_001776_170 Hb_001488_370--Hb_001776_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.296208 5.80125 0.82149 3.10956 0.531681 2.10536
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.12512 11.3515 6.34437 3.74503 0

CAGE analysis