Hb_001213_130

Information

Type -
Description -
Location Contig1213: 136210-138538
Sequence    

Annotation

kegg
ID rcu:RCOM_0085730
description fructokinase, putative (EC:2.7.1.4)
nr
ID XP_012087948.1
description PREDICTED: fructokinase-like 1, chloroplastic [Jatropha curcas]
swissprot
ID Q9M394
description Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana GN=FLN1 PE=1 SV=1
trembl
ID A0A067JKJ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25070 PE=4 SV=1
Gene Ontology
ID GO:0016773
description fructokinase-like chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06528: 136265-138513
cDNA
(Sanger)
(ID:Location)		 010_I13.ab1: 136265-137000 , 049_H19r.ab1: 134795-135932 , 051_J23.ab1: 136265-136976

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001213_130 0.0 - - PREDICTED: fructokinase-like 1, chloroplastic [Jatropha curcas]
2 Hb_001652_080 0.0922382289 - - PREDICTED: uncharacterized protein LOC105643776 [Jatropha curcas]
3 Hb_000963_130 0.109036114 - - RNA m5u methyltransferase, putative [Ricinus communis]
4 Hb_000390_310 0.1110005304 - - PREDICTED: uncharacterized protein LOC105632456 isoform X2 [Jatropha curcas]
5 Hb_000076_260 0.1119563704 - - hypothetical protein GUITHDRAFT_149979 [Guillardia theta CCMP2712]
6 Hb_032202_230 0.11292537 - - peroxisomal biogenesis factor, putative [Ricinus communis]
7 Hb_000077_010 0.1133780182 - - unnamed protein product [Vitis vinifera]
8 Hb_003994_200 0.1147230509 - - PREDICTED: uncharacterized protein LOC105646142 [Jatropha curcas]
9 Hb_004951_070 0.114928595 desease resistance Gene Name: AAA Stage III sporulation protein AA, putative [Ricinus communis]
10 Hb_000849_020 0.1222263235 - - PREDICTED: uncharacterized protein LOC105644228 isoform X1 [Jatropha curcas]
11 Hb_000175_590 0.1260147078 - - PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic [Jatropha curcas]
12 Hb_002783_120 0.1275001103 - - PREDICTED: uncharacterized protein LOC105635329 [Jatropha curcas]
13 Hb_000453_190 0.128779833 transcription factor TF Family: MYB PREDICTED: transcription factor GAMYB-like [Jatropha curcas]
14 Hb_004079_120 0.1309408804 - - PREDICTED: splicing factor, arginine/serine-rich 19 [Jatropha curcas]
15 Hb_003292_050 0.132941504 transcription factor TF Family: TUB PREDICTED: tubby-like F-box protein 7 [Jatropha curcas]
16 Hb_030312_080 0.1341913755 - - calcium-dependent protein kinase 6 [Hevea brasiliensis]
17 Hb_002093_030 0.1356966105 - - PREDICTED: uncharacterized protein LOC105648523 [Jatropha curcas]
18 Hb_007007_060 0.1358348581 - - PREDICTED: peroxisome biogenesis protein 16-like isoform X1 [Jatropha curcas]
19 Hb_022693_030 0.1363876607 - - PREDICTED: zinc finger protein GIS2 [Jatropha curcas]
20 Hb_008103_080 0.1369087805 - - PREDICTED: lycopene epsilon cyclase, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_001213_130 Hb_001213_130 Hb_001652_080 Hb_001652_080 Hb_001213_130--Hb_001652_080 Hb_000963_130 Hb_000963_130 Hb_001213_130--Hb_000963_130 Hb_000390_310 Hb_000390_310 Hb_001213_130--Hb_000390_310 Hb_000076_260 Hb_000076_260 Hb_001213_130--Hb_000076_260 Hb_032202_230 Hb_032202_230 Hb_001213_130--Hb_032202_230 Hb_000077_010 Hb_000077_010 Hb_001213_130--Hb_000077_010 Hb_001652_080--Hb_032202_230 Hb_000042_340 Hb_000042_340 Hb_001652_080--Hb_000042_340 Hb_007904_120 Hb_007904_120 Hb_001652_080--Hb_007904_120 Hb_003994_200 Hb_003994_200 Hb_001652_080--Hb_003994_200 Hb_007007_060 Hb_007007_060 Hb_001652_080--Hb_007007_060 Hb_000227_250 Hb_000227_250 Hb_001652_080--Hb_000227_250 Hb_028872_120 Hb_028872_120 Hb_000963_130--Hb_028872_120 Hb_005332_020 Hb_005332_020 Hb_000963_130--Hb_005332_020 Hb_008887_020 Hb_008887_020 Hb_000963_130--Hb_008887_020 Hb_004079_120 Hb_004079_120 Hb_000963_130--Hb_004079_120 Hb_000922_140 Hb_000922_140 Hb_000963_130--Hb_000922_140 Hb_022256_060 Hb_022256_060 Hb_000963_130--Hb_022256_060 Hb_000948_180 Hb_000948_180 Hb_000390_310--Hb_000948_180 Hb_000390_310--Hb_032202_230 Hb_004951_070 Hb_004951_070 Hb_000390_310--Hb_004951_070 Hb_000175_590 Hb_000175_590 Hb_000390_310--Hb_000175_590 Hb_000390_310--Hb_001652_080 Hb_000453_140 Hb_000453_140 Hb_000076_260--Hb_000453_140 Hb_002092_100 Hb_002092_100 Hb_000076_260--Hb_002092_100 Hb_000661_020 Hb_000661_020 Hb_000076_260--Hb_000661_020 Hb_000735_100 Hb_000735_100 Hb_000076_260--Hb_000735_100 Hb_011915_010 Hb_011915_010 Hb_000076_260--Hb_011915_010 Hb_150651_030 Hb_150651_030 Hb_000076_260--Hb_150651_030 Hb_000368_020 Hb_000368_020 Hb_032202_230--Hb_000368_020 Hb_006452_160 Hb_006452_160 Hb_032202_230--Hb_006452_160 Hb_000576_050 Hb_000576_050 Hb_032202_230--Hb_000576_050 Hb_032202_230--Hb_003994_200 Hb_032202_230--Hb_000042_340 Hb_000436_100 Hb_000436_100 Hb_000077_010--Hb_000436_100 Hb_016734_090 Hb_016734_090 Hb_000077_010--Hb_016734_090 Hb_002739_130 Hb_002739_130 Hb_000077_010--Hb_002739_130 Hb_000077_010--Hb_004079_120 Hb_000156_160 Hb_000156_160 Hb_000077_010--Hb_000156_160 Hb_006658_030 Hb_006658_030 Hb_000077_010--Hb_006658_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.0702 8.47983 18.2222 3.24679 19.8544 14.4761
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.73378 6.21404 7.8515 4.23357 12.8989

CAGE analysis