Hb_001205_060

Information

Type -
Description -
Location Contig1205: 37646-38755
Sequence    

Annotation

kegg
ID rcu:RCOM_0536710
description hypothetical protein
nr
ID XP_012071640.1
description PREDICTED: protein N-lysine methyltransferase METTL21A [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUE4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05310 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001205_060 0.0 - - PREDICTED: protein N-lysine methyltransferase METTL21A [Jatropha curcas]
2 Hb_010672_080 0.2023475148 transcription factor TF Family: MYB hypothetical protein JCGZ_00902 [Jatropha curcas]
3 Hb_000680_070 0.2098324383 - - PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Jatropha curcas]
4 Hb_002811_240 0.2106361356 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002379_060 0.2121846471 - - PREDICTED: MACPF domain-containing protein At1g14780 [Jatropha curcas]
6 Hb_019278_010 0.2233547059 - - PREDICTED: uncharacterized protein LOC105638282 [Jatropha curcas]
7 Hb_005455_010 0.2253834755 - - PREDICTED: probable acyl-activating enzyme 18, peroxisomal isoform X1 [Jatropha curcas]
8 Hb_000087_120 0.2257024121 - - AMP dependent CoA ligase, putative [Ricinus communis]
9 Hb_000072_110 0.2282593962 - - PREDICTED: U-box domain-containing protein 35 [Jatropha curcas]
10 Hb_002874_030 0.2328713895 - - hypothetical protein JCGZ_07001 [Jatropha curcas]
11 Hb_000337_030 0.2342857042 - - amino acid transporter, putative [Ricinus communis]
12 Hb_170023_010 0.2348363184 - - hypothetical protein EUGRSUZ_C03837 [Eucalyptus grandis]
13 Hb_007850_110 0.2354830607 - - MADS-box transcription factor 3 [Hevea brasiliensis]
14 Hb_000215_130 0.2360778184 - - PREDICTED: probable pectinesterase 53 [Jatropha curcas]
15 Hb_000720_090 0.2401839534 transcription factor TF Family: MYB myb, putative [Ricinus communis]
16 Hb_004943_010 0.2423177683 - - cationic amino acid transporter, putative [Ricinus communis]
17 Hb_168319_060 0.2428730866 - - PREDICTED: cytochrome P450 CYP749A22-like [Populus euphratica]
18 Hb_002893_190 0.2440060845 - - unnamed protein product [Coffea canephora]
19 Hb_000847_120 0.2443884496 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
20 Hb_006469_090 0.2449811253 - - PREDICTED: LOW QUALITY PROTEIN: myosin-11 [Jatropha curcas]

Gene co-expression network

sample Hb_001205_060 Hb_001205_060 Hb_010672_080 Hb_010672_080 Hb_001205_060--Hb_010672_080 Hb_000680_070 Hb_000680_070 Hb_001205_060--Hb_000680_070 Hb_002811_240 Hb_002811_240 Hb_001205_060--Hb_002811_240 Hb_002379_060 Hb_002379_060 Hb_001205_060--Hb_002379_060 Hb_019278_010 Hb_019278_010 Hb_001205_060--Hb_019278_010 Hb_005455_010 Hb_005455_010 Hb_001205_060--Hb_005455_010 Hb_000009_440 Hb_000009_440 Hb_010672_080--Hb_000009_440 Hb_000720_090 Hb_000720_090 Hb_010672_080--Hb_000720_090 Hb_000707_010 Hb_000707_010 Hb_010672_080--Hb_000707_010 Hb_000625_030 Hb_000625_030 Hb_010672_080--Hb_000625_030 Hb_003086_010 Hb_003086_010 Hb_010672_080--Hb_003086_010 Hb_000343_040 Hb_000343_040 Hb_010672_080--Hb_000343_040 Hb_001439_010 Hb_001439_010 Hb_000680_070--Hb_001439_010 Hb_005663_090 Hb_005663_090 Hb_000680_070--Hb_005663_090 Hb_006469_090 Hb_006469_090 Hb_000680_070--Hb_006469_090 Hb_000337_030 Hb_000337_030 Hb_000680_070--Hb_000337_030 Hb_007850_110 Hb_007850_110 Hb_000680_070--Hb_007850_110 Hb_004032_110 Hb_004032_110 Hb_000680_070--Hb_004032_110 Hb_002811_240--Hb_000680_070 Hb_002811_240--Hb_005455_010 Hb_001754_120 Hb_001754_120 Hb_002811_240--Hb_001754_120 Hb_001040_150 Hb_001040_150 Hb_002811_240--Hb_001040_150 Hb_178968_080 Hb_178968_080 Hb_002811_240--Hb_178968_080 Hb_000032_600 Hb_000032_600 Hb_002811_240--Hb_000032_600 Hb_000087_120 Hb_000087_120 Hb_002379_060--Hb_000087_120 Hb_002379_060--Hb_019278_010 Hb_004943_010 Hb_004943_010 Hb_002379_060--Hb_004943_010 Hb_001300_140 Hb_001300_140 Hb_002379_060--Hb_001300_140 Hb_000836_260 Hb_000836_260 Hb_002379_060--Hb_000836_260 Hb_170023_010 Hb_170023_010 Hb_002379_060--Hb_170023_010 Hb_019278_010--Hb_170023_010 Hb_019278_010--Hb_000087_120 Hb_019278_010--Hb_000337_030 Hb_004709_030 Hb_004709_030 Hb_019278_010--Hb_004709_030 Hb_000365_440 Hb_000365_440 Hb_019278_010--Hb_000365_440 Hb_138229_010 Hb_138229_010 Hb_005455_010--Hb_138229_010 Hb_000699_050 Hb_000699_050 Hb_005455_010--Hb_000699_050 Hb_001226_100 Hb_001226_100 Hb_005455_010--Hb_001226_100 Hb_007007_130 Hb_007007_130 Hb_005455_010--Hb_007007_130 Hb_000152_770 Hb_000152_770 Hb_005455_010--Hb_000152_770
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0857566 0.626662 0.521361 0.0913296 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.23005 0 0 0.944579 0.928156

CAGE analysis