Hb_001017_050

Information

Type -
Description -
Location Contig1017: 58774-68469
Sequence    

Annotation

kegg
ID rcu:RCOM_1083710
description hydrolase, hydrolyzing O-glycosyl compounds, putative
nr
ID XP_002515055.1
description hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RMT6
description Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Ricinus communis GN=RCOM_1083710 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001017_050 0.0 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
2 Hb_078494_010 0.1037967478 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 4-like [Jatropha curcas]
3 Hb_012633_040 0.108530894 - - -
4 Hb_000296_070 0.1130119866 - - hypothetical protein B456_003G048700 [Gossypium raimondii]
5 Hb_011716_070 0.1134534286 transcription factor TF Family: HRT PREDICTED: uncharacterized protein LOC105637858 isoform X1 [Jatropha curcas]
6 Hb_012035_050 0.114304937 - - hypothetical protein JCGZ_10788 [Jatropha curcas]
7 Hb_003494_200 0.1156329551 - - PREDICTED: beta-1,3-galactosyltransferase 15-like [Jatropha curcas]
8 Hb_000907_110 0.1178865139 - - dihydroxyacetone kinase family protein [Populus trichocarpa]
9 Hb_007254_070 0.1220734865 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1 [Jatropha curcas]
10 Hb_011249_010 0.1239152316 - - PREDICTED: N-alpha-acetyltransferase 35, NatC auxiliary subunit isoform X1 [Jatropha curcas]
11 Hb_008147_070 0.1240178034 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
12 Hb_001114_140 0.1248921197 - - PREDICTED: uncharacterized protein LOC105631631 [Jatropha curcas]
13 Hb_000329_470 0.1262240589 - - ccr4-not transcription complex, putative [Ricinus communis]
14 Hb_005730_090 0.1263827167 - - PREDICTED: uncharacterized protein LOC105631484 [Jatropha curcas]
15 Hb_009558_030 0.1264702985 - - myb3r3, putative [Ricinus communis]
16 Hb_002903_060 0.1273898246 - - PREDICTED: uncharacterized protein LOC105649505 [Jatropha curcas]
17 Hb_001723_020 0.1291332648 - - PREDICTED: nuclear export mediator factor Nemf [Jatropha curcas]
18 Hb_001021_080 0.1292738844 - - PREDICTED: autophagy-related protein 18a [Jatropha curcas]
19 Hb_000377_090 0.1294402616 rubber biosynthesis Gene Name: Acetyl-CoA acetyltransferase acetyl-CoA C-acetyltransferase [Hevea brasiliensis]
20 Hb_000252_170 0.1304060079 - - PREDICTED: uncharacterized protein LOC105644650 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_001017_050 Hb_001017_050 Hb_078494_010 Hb_078494_010 Hb_001017_050--Hb_078494_010 Hb_012633_040 Hb_012633_040 Hb_001017_050--Hb_012633_040 Hb_000296_070 Hb_000296_070 Hb_001017_050--Hb_000296_070 Hb_011716_070 Hb_011716_070 Hb_001017_050--Hb_011716_070 Hb_012035_050 Hb_012035_050 Hb_001017_050--Hb_012035_050 Hb_003494_200 Hb_003494_200 Hb_001017_050--Hb_003494_200 Hb_078494_010--Hb_012633_040 Hb_078494_010--Hb_003494_200 Hb_078494_010--Hb_012035_050 Hb_012506_050 Hb_012506_050 Hb_078494_010--Hb_012506_050 Hb_078494_010--Hb_011716_070 Hb_003465_030 Hb_003465_030 Hb_012633_040--Hb_003465_030 Hb_000907_110 Hb_000907_110 Hb_012633_040--Hb_000907_110 Hb_000181_400 Hb_000181_400 Hb_012633_040--Hb_000181_400 Hb_007416_120 Hb_007416_120 Hb_012633_040--Hb_007416_120 Hb_000170_070 Hb_000170_070 Hb_012633_040--Hb_000170_070 Hb_000749_190 Hb_000749_190 Hb_012633_040--Hb_000749_190 Hb_000252_170 Hb_000252_170 Hb_000296_070--Hb_000252_170 Hb_007254_070 Hb_007254_070 Hb_000296_070--Hb_007254_070 Hb_002903_060 Hb_002903_060 Hb_000296_070--Hb_002903_060 Hb_000123_210 Hb_000123_210 Hb_000296_070--Hb_000123_210 Hb_000296_070--Hb_000907_110 Hb_120327_010 Hb_120327_010 Hb_000296_070--Hb_120327_010 Hb_000221_250 Hb_000221_250 Hb_011716_070--Hb_000221_250 Hb_015175_050 Hb_015175_050 Hb_011716_070--Hb_015175_050 Hb_002344_060 Hb_002344_060 Hb_011716_070--Hb_002344_060 Hb_001860_030 Hb_001860_030 Hb_011716_070--Hb_001860_030 Hb_002400_410 Hb_002400_410 Hb_011716_070--Hb_002400_410 Hb_004324_130 Hb_004324_130 Hb_011716_070--Hb_004324_130 Hb_001579_220 Hb_001579_220 Hb_012035_050--Hb_001579_220 Hb_009558_030 Hb_009558_030 Hb_012035_050--Hb_009558_030 Hb_012035_050--Hb_000170_070 Hb_000111_420 Hb_000111_420 Hb_012035_050--Hb_000111_420 Hb_000329_470 Hb_000329_470 Hb_012035_050--Hb_000329_470 Hb_155159_030 Hb_155159_030 Hb_012035_050--Hb_155159_030 Hb_000130_410 Hb_000130_410 Hb_003494_200--Hb_000130_410 Hb_003494_200--Hb_000907_110 Hb_000220_220 Hb_000220_220 Hb_003494_200--Hb_000220_220 Hb_000680_160 Hb_000680_160 Hb_003494_200--Hb_000680_160 Hb_003294_070 Hb_003294_070 Hb_003494_200--Hb_003294_070 Hb_000015_040 Hb_000015_040 Hb_003494_200--Hb_000015_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.56436 1.20192 0.377579 0.555305 1.35529 0.629667
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.56608 0.807274 0.88207 1.50697 0.803944

CAGE analysis