Hb_003494_200

Information

Type -
Description -
Location Contig3494: 196239-202445
Sequence    

Annotation

kegg
ID vvi:100242374
description beta-1,3-galactosyltransferase 15-like
nr
ID XP_012084709.1
description PREDICTED: beta-1,3-galactosyltransferase 15-like [Jatropha curcas]
swissprot
ID Q8L7F9
description Beta-1,3-galactosyltransferase 15 OS=Arabidopsis thaliana GN=B3GALT15 PE=2 SV=1
trembl
ID A0A067K5T1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19853 PE=4 SV=1
Gene Ontology
ID GO:0016020
description beta- -galactosyltransferase 15

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36360: 197100-199138
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003494_200 0.0 - - PREDICTED: beta-1,3-galactosyltransferase 15-like [Jatropha curcas]
2 Hb_000130_410 0.0753421804 - - PREDICTED: uncharacterized protein LOC105635730 [Jatropha curcas]
3 Hb_000907_110 0.0796751407 - - dihydroxyacetone kinase family protein [Populus trichocarpa]
4 Hb_000220_220 0.0812092617 - - PREDICTED: uncharacterized protein LOC105636907 [Jatropha curcas]
5 Hb_000680_160 0.0863956385 - - PREDICTED: protein FLX-like 3 [Jatropha curcas]
6 Hb_003294_070 0.088889829 - - hypothetical protein RCOM_1714550 [Ricinus communis]
7 Hb_000015_040 0.0892171991 - - PREDICTED: uncharacterized protein LOC105647937 isoform X2 [Jatropha curcas]
8 Hb_001579_220 0.093115282 - - PREDICTED: pantothenate kinase 1 [Jatropha curcas]
9 Hb_000181_400 0.0951407354 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 25 isoform X2 [Jatropha curcas]
10 Hb_002641_030 0.0962685041 - - PREDICTED: flowering time control protein FCA isoform X1 [Jatropha curcas]
11 Hb_007254_070 0.0964385485 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1 [Jatropha curcas]
12 Hb_000329_470 0.0977710355 - - ccr4-not transcription complex, putative [Ricinus communis]
13 Hb_002217_510 0.097894794 - - conserved hypothetical protein [Ricinus communis]
14 Hb_033642_090 0.0980041968 - - conserved hypothetical protein [Ricinus communis]
15 Hb_012633_040 0.0983925454 - - -
16 Hb_001396_200 0.0991018747 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 4 isoform X1 [Jatropha curcas]
17 Hb_000032_270 0.0995963285 - - PREDICTED: F-box/LRR-repeat protein 13 [Jatropha curcas]
18 Hb_003761_010 0.1012166251 - - alcohol dehydrogenase, putative [Ricinus communis]
19 Hb_000221_250 0.102228587 - - hypothetical protein JCGZ_15814 [Jatropha curcas]
20 Hb_008959_020 0.1023478558 - - PREDICTED: nitric oxide synthase-interacting protein [Pyrus x bretschneideri]

Gene co-expression network

sample Hb_003494_200 Hb_003494_200 Hb_000130_410 Hb_000130_410 Hb_003494_200--Hb_000130_410 Hb_000907_110 Hb_000907_110 Hb_003494_200--Hb_000907_110 Hb_000220_220 Hb_000220_220 Hb_003494_200--Hb_000220_220 Hb_000680_160 Hb_000680_160 Hb_003494_200--Hb_000680_160 Hb_003294_070 Hb_003294_070 Hb_003494_200--Hb_003294_070 Hb_000015_040 Hb_000015_040 Hb_003494_200--Hb_000015_040 Hb_000318_250 Hb_000318_250 Hb_000130_410--Hb_000318_250 Hb_002026_210 Hb_002026_210 Hb_000130_410--Hb_002026_210 Hb_001396_200 Hb_001396_200 Hb_000130_410--Hb_001396_200 Hb_000708_030 Hb_000708_030 Hb_000130_410--Hb_000708_030 Hb_004324_130 Hb_004324_130 Hb_000130_410--Hb_004324_130 Hb_001546_080 Hb_001546_080 Hb_000130_410--Hb_001546_080 Hb_000181_400 Hb_000181_400 Hb_000907_110--Hb_000181_400 Hb_033642_090 Hb_033642_090 Hb_000907_110--Hb_033642_090 Hb_001357_250 Hb_001357_250 Hb_000907_110--Hb_001357_250 Hb_028285_010 Hb_028285_010 Hb_000907_110--Hb_028285_010 Hb_000907_110--Hb_004324_130 Hb_000907_110--Hb_000130_410 Hb_000116_440 Hb_000116_440 Hb_000220_220--Hb_000116_440 Hb_001579_220 Hb_001579_220 Hb_000220_220--Hb_001579_220 Hb_000220_220--Hb_000680_160 Hb_029879_110 Hb_029879_110 Hb_000220_220--Hb_029879_110 Hb_000853_170 Hb_000853_170 Hb_000220_220--Hb_000853_170 Hb_000032_270 Hb_000032_270 Hb_000680_160--Hb_000032_270 Hb_002078_350 Hb_002078_350 Hb_000680_160--Hb_002078_350 Hb_003428_030 Hb_003428_030 Hb_000680_160--Hb_003428_030 Hb_003525_010 Hb_003525_010 Hb_000680_160--Hb_003525_010 Hb_000680_160--Hb_001579_220 Hb_005188_080 Hb_005188_080 Hb_000680_160--Hb_005188_080 Hb_003294_070--Hb_000181_400 Hb_009079_030 Hb_009079_030 Hb_003294_070--Hb_009079_030 Hb_003294_070--Hb_004324_130 Hb_165928_030 Hb_165928_030 Hb_003294_070--Hb_165928_030 Hb_000181_320 Hb_000181_320 Hb_003294_070--Hb_000181_320 Hb_000003_320 Hb_000003_320 Hb_003294_070--Hb_000003_320 Hb_029584_050 Hb_029584_050 Hb_000015_040--Hb_029584_050 Hb_000015_040--Hb_001579_220 Hb_003050_220 Hb_003050_220 Hb_000015_040--Hb_003050_220 Hb_006615_020 Hb_006615_020 Hb_000015_040--Hb_006615_020 Hb_002000_080 Hb_002000_080 Hb_000015_040--Hb_002000_080 Hb_003761_010 Hb_003761_010 Hb_000015_040--Hb_003761_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.08064 1.6804 0.737375 0.952014 1.33503 1.46243
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.21718 1.74458 0.915147 1.84984 0.949693

CAGE analysis