Hb_000896_110

Information

Type -
Description -
Location Contig896: 92351-94007
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000896_110 0.0 - - -
2 Hb_092233_010 0.2126280156 - - RecName: Full=Profilin-3; AltName: Full=Pollen allergen Hev b 8.0201; AltName: Allergen=Hev b 8.0201 [Hevea brasiliensis]
3 Hb_005245_070 0.2341987845 - - PREDICTED: uncharacterized protein LOC105643658 [Jatropha curcas]
4 Hb_000175_140 0.2358934744 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001635_020 0.2420220841 - - PREDICTED: inorganic pyrophosphatase 1-like [Jatropha curcas]
6 Hb_003502_100 0.2436379206 - - -
7 Hb_001922_180 0.24505241 - - hevamine-A precursor, putative [Ricinus communis]
8 Hb_033376_010 0.252220074 - - hypothetical protein POPTR_0008s02960g [Populus trichocarpa]
9 Hb_008215_030 0.2585306386 - - hypothetical protein 3 [Hevea brasiliensis]
10 Hb_000483_090 0.267124279 - - -
11 Hb_003702_080 0.2695465284 - - cysteine protease, putative [Ricinus communis]
12 Hb_002043_120 0.2718658381 - - protein with unknown function [Ricinus communis]
13 Hb_116420_020 0.2738282365 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
14 Hb_000205_200 0.2750726767 - - -
15 Hb_144484_010 0.2754026757 - - calcineurin-like phosphoesterase [Manihot esculenta]
16 Hb_004128_040 0.2778088529 - - -
17 Hb_000167_030 0.2779783628 - - PREDICTED: uncharacterized protein LOC105641111 isoform X1 [Jatropha curcas]
18 Hb_000975_180 0.2815814751 - - Uncharacterized protein TCM_041879 [Theobroma cacao]
19 Hb_007553_010 0.2892044459 - - -
20 Hb_002704_050 0.2897567644 - - cysteine-type peptidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000896_110 Hb_000896_110 Hb_092233_010 Hb_092233_010 Hb_000896_110--Hb_092233_010 Hb_005245_070 Hb_005245_070 Hb_000896_110--Hb_005245_070 Hb_000175_140 Hb_000175_140 Hb_000896_110--Hb_000175_140 Hb_001635_020 Hb_001635_020 Hb_000896_110--Hb_001635_020 Hb_003502_100 Hb_003502_100 Hb_000896_110--Hb_003502_100 Hb_001922_180 Hb_001922_180 Hb_000896_110--Hb_001922_180 Hb_092233_010--Hb_000175_140 Hb_000205_200 Hb_000205_200 Hb_092233_010--Hb_000205_200 Hb_033376_010 Hb_033376_010 Hb_092233_010--Hb_033376_010 Hb_005021_010 Hb_005021_010 Hb_092233_010--Hb_005021_010 Hb_000072_340 Hb_000072_340 Hb_092233_010--Hb_000072_340 Hb_000367_030 Hb_000367_030 Hb_005245_070--Hb_000367_030 Hb_000975_180 Hb_000975_180 Hb_005245_070--Hb_000975_180 Hb_005245_070--Hb_003502_100 Hb_021924_010 Hb_021924_010 Hb_005245_070--Hb_021924_010 Hb_004429_110 Hb_004429_110 Hb_005245_070--Hb_004429_110 Hb_004128_040 Hb_004128_040 Hb_005245_070--Hb_004128_040 Hb_006570_050 Hb_006570_050 Hb_000175_140--Hb_006570_050 Hb_000483_090 Hb_000483_090 Hb_000175_140--Hb_000483_090 Hb_117092_010 Hb_117092_010 Hb_000175_140--Hb_117092_010 Hb_001164_030 Hb_001164_030 Hb_000175_140--Hb_001164_030 Hb_000000_470 Hb_000000_470 Hb_001635_020--Hb_000000_470 Hb_005527_040 Hb_005527_040 Hb_001635_020--Hb_005527_040 Hb_144484_010 Hb_144484_010 Hb_001635_020--Hb_144484_010 Hb_000007_040 Hb_000007_040 Hb_001635_020--Hb_000007_040 Hb_005663_120 Hb_005663_120 Hb_001635_020--Hb_005663_120 Hb_007218_150 Hb_007218_150 Hb_001635_020--Hb_007218_150 Hb_003502_100--Hb_004128_040 Hb_003502_100--Hb_000975_180 Hb_001842_050 Hb_001842_050 Hb_003502_100--Hb_001842_050 Hb_003502_100--Hb_000367_030 Hb_009778_040 Hb_009778_040 Hb_003502_100--Hb_009778_040 Hb_001922_180--Hb_033376_010 Hb_001205_160 Hb_001205_160 Hb_001922_180--Hb_001205_160 Hb_001922_180--Hb_000975_180 Hb_000130_100 Hb_000130_100 Hb_001922_180--Hb_000130_100 Hb_000032_050 Hb_000032_050 Hb_001922_180--Hb_000032_050 Hb_001922_180--Hb_003502_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.675826 0 0 6.15871 0.281502 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.10639 8.71706 2.47813 0.454353 0

CAGE analysis