Hb_001635_020

Information

Type -
Description -
Location Contig1635: 21049-24218
Sequence    

Annotation

kegg
ID pop:POPTR_0008s20130g
description POPTRDRAFT_657611; hypothetical protein
nr
ID XP_012069009.1
description PREDICTED: inorganic pyrophosphatase 1-like [Jatropha curcas]
swissprot
ID Q67YC0
description Inorganic pyrophosphatase 1 OS=Arabidopsis thaliana GN=PS2 PE=1 SV=1
trembl
ID A0A067L0Q7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24797 PE=4 SV=1
Gene Ontology
ID GO:0052731
description phosphoethanolamine phosphocholine

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 005_C08.ab1: 20895-21255 , 052_I01.ab1: 20623-21210

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001635_020 0.0 - - PREDICTED: inorganic pyrophosphatase 1-like [Jatropha curcas]
2 Hb_000000_470 0.1663371919 - - PREDICTED: lysophospholipid acyltransferase LPEAT1 isoform X4 [Jatropha curcas]
3 Hb_005527_040 0.1731250086 - - PREDICTED: methionine adenosyltransferase 2 subunit beta [Jatropha curcas]
4 Hb_144484_010 0.1765254883 - - calcineurin-like phosphoesterase [Manihot esculenta]
5 Hb_000007_040 0.1832139482 - - hypothetical protein MIMGU_mgv1a017616mg [Erythranthe guttata]
6 Hb_005663_120 0.1912398149 - - PREDICTED: uncharacterized protein LOC105635265 [Jatropha curcas]
7 Hb_007218_150 0.1929186114 - - RecName: Full=Profilin-3; AltName: Full=Pollen allergen Hev b 8.0201; AltName: Allergen=Hev b 8.0201 [Hevea brasiliensis]
8 Hb_050806_010 0.1973458947 - - PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Jatropha curcas]
9 Hb_002843_210 0.1982427287 - - PREDICTED: uncharacterized protein LOC105647178 [Jatropha curcas]
10 Hb_029904_040 0.1983166085 - - putative aspartate aminotransferase protein, partial [Elaeis guineensis]
11 Hb_002603_060 0.1997422868 - - PREDICTED: protein EARLY FLOWERING 4 [Jatropha curcas]
12 Hb_001232_140 0.2008084026 - - PREDICTED: uncharacterized protein LOC105634966 [Jatropha curcas]
13 Hb_005245_070 0.2012922943 - - PREDICTED: uncharacterized protein LOC105643658 [Jatropha curcas]
14 Hb_001504_140 0.2049581375 - - PREDICTED: deSI-like protein At4g17486 [Populus euphratica]
15 Hb_000260_790 0.2068583492 - - NADH dehydrogenase 1 alpha subcomplex subunit 12 isoform 1 [Theobroma cacao]
16 Hb_007317_160 0.2078330057 - - PREDICTED: uncharacterized protein At2g27730, mitochondrial [Jatropha curcas]
17 Hb_000049_050 0.2085170519 - - PREDICTED: uncharacterized protein LOC105644474 [Jatropha curcas]
18 Hb_152021_010 0.2086059445 - - PREDICTED: uncharacterized protein LOC105639312 isoform X2 [Jatropha curcas]
19 Hb_000896_120 0.2089010002 - - PREDICTED: acyl-protein thioesterase 2-like [Populus euphratica]
20 Hb_001096_030 0.2089028209 - - uridylate kinase plant, putative [Ricinus communis]

Gene co-expression network

sample Hb_001635_020 Hb_001635_020 Hb_000000_470 Hb_000000_470 Hb_001635_020--Hb_000000_470 Hb_005527_040 Hb_005527_040 Hb_001635_020--Hb_005527_040 Hb_144484_010 Hb_144484_010 Hb_001635_020--Hb_144484_010 Hb_000007_040 Hb_000007_040 Hb_001635_020--Hb_000007_040 Hb_005663_120 Hb_005663_120 Hb_001635_020--Hb_005663_120 Hb_007218_150 Hb_007218_150 Hb_001635_020--Hb_007218_150 Hb_007317_160 Hb_007317_160 Hb_000000_470--Hb_007317_160 Hb_000000_470--Hb_005527_040 Hb_006452_040 Hb_006452_040 Hb_000000_470--Hb_006452_040 Hb_027073_050 Hb_027073_050 Hb_000000_470--Hb_027073_050 Hb_000069_550 Hb_000069_550 Hb_000000_470--Hb_000069_550 Hb_006569_100 Hb_006569_100 Hb_000000_470--Hb_006569_100 Hb_001519_030 Hb_001519_030 Hb_005527_040--Hb_001519_030 Hb_005527_040--Hb_006569_100 Hb_001005_080 Hb_001005_080 Hb_005527_040--Hb_001005_080 Hb_004449_200 Hb_004449_200 Hb_005527_040--Hb_004449_200 Hb_005527_040--Hb_005663_120 Hb_000122_020 Hb_000122_020 Hb_005527_040--Hb_000122_020 Hb_012022_130 Hb_012022_130 Hb_144484_010--Hb_012022_130 Hb_001504_140 Hb_001504_140 Hb_144484_010--Hb_001504_140 Hb_001712_040 Hb_001712_040 Hb_144484_010--Hb_001712_040 Hb_000922_120 Hb_000922_120 Hb_144484_010--Hb_000922_120 Hb_000167_030 Hb_000167_030 Hb_144484_010--Hb_000167_030 Hb_004650_100 Hb_004650_100 Hb_000007_040--Hb_004650_100 Hb_002233_120 Hb_002233_120 Hb_000007_040--Hb_002233_120 Hb_002473_110 Hb_002473_110 Hb_000007_040--Hb_002473_110 Hb_002828_040 Hb_002828_040 Hb_000007_040--Hb_002828_040 Hb_000367_030 Hb_000367_030 Hb_000007_040--Hb_000367_030 Hb_000300_390 Hb_000300_390 Hb_005663_120--Hb_000300_390 Hb_012539_020 Hb_012539_020 Hb_005663_120--Hb_012539_020 Hb_002316_120 Hb_002316_120 Hb_005663_120--Hb_002316_120 Hb_032969_030 Hb_032969_030 Hb_005663_120--Hb_032969_030 Hb_000389_080 Hb_000389_080 Hb_005663_120--Hb_000389_080 Hb_007218_150--Hb_007317_160 Hb_007218_150--Hb_032969_030 Hb_007218_150--Hb_000300_390 Hb_007218_150--Hb_005663_120 Hb_000789_110 Hb_000789_110 Hb_007218_150--Hb_000789_110 Hb_007218_150--Hb_000167_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.8104 2.98683 2.26174 77.6578 13.0662 7.39401
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
112.579 85.754 75.2086 21.2475 6.87274

CAGE analysis