Hb_144484_010

Information

Type -
Description -
Location Contig144484: 230-1114
Sequence    

Annotation

kegg
ID pop:POPTR_0003s17460g
description POPTRDRAFT_414694; hypothetical protein
nr
ID AGL44401.1
description calcineurin-like phosphoesterase [Manihot esculenta]
swissprot
ID Q6TPH1
description Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2
trembl
ID V9NC54
description Purple acid phosphatase OS=Manihot esculenta GN=PAP23 PE=2 SV=1
Gene Ontology
ID GO:0003993
description purple acid phosphatase 23

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_144484_010 0.0 - - calcineurin-like phosphoesterase [Manihot esculenta]
2 Hb_012022_130 0.1465427699 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
3 Hb_001504_140 0.1608071842 - - PREDICTED: deSI-like protein At4g17486 [Populus euphratica]
4 Hb_001635_020 0.1765254883 - - PREDICTED: inorganic pyrophosphatase 1-like [Jatropha curcas]
5 Hb_001712_040 0.1826919499 - - Calmodulin, putative [Ricinus communis]
6 Hb_000922_120 0.1981270539 - - PREDICTED: carbonic anhydrase 2-like [Jatropha curcas]
7 Hb_000167_030 0.2289835738 - - PREDICTED: uncharacterized protein LOC105641111 isoform X1 [Jatropha curcas]
8 Hb_005671_020 0.231401781 - - PREDICTED: vacuolar amino acid transporter 1 [Jatropha curcas]
9 Hb_011316_060 0.2368215516 - - alpha-l-fucosidase, putative [Ricinus communis]
10 Hb_001959_130 0.2410774116 - - transporter, putative [Ricinus communis]
11 Hb_011472_010 0.2413222145 - - PREDICTED: protein yippee-like [Jatropha curcas]
12 Hb_001232_140 0.2435715413 - - PREDICTED: uncharacterized protein LOC105634966 [Jatropha curcas]
13 Hb_000178_120 0.2468815765 - - PREDICTED: histone H2B [Jatropha curcas]
14 Hb_012163_020 0.2475136727 - - PREDICTED: uncharacterized protein LOC105650815 isoform X3 [Jatropha curcas]
15 Hb_001930_090 0.2478076336 - - DNA binding protein, putative [Ricinus communis]
16 Hb_001096_030 0.2492430987 - - uridylate kinase plant, putative [Ricinus communis]
17 Hb_003032_100 0.2514630975 - - PREDICTED: GDP-mannose transporter GONST4 [Jatropha curcas]
18 Hb_024154_020 0.2536627243 - - polyphenol oxidase [Hevea brasiliensis]
19 Hb_033152_050 0.2553515517 - - hypothetical protein JCGZ_04890 [Jatropha curcas]
20 Hb_000099_130 0.2556671408 - - PREDICTED: uncharacterized protein LOC105645728 [Jatropha curcas]

Gene co-expression network

sample Hb_144484_010 Hb_144484_010 Hb_012022_130 Hb_012022_130 Hb_144484_010--Hb_012022_130 Hb_001504_140 Hb_001504_140 Hb_144484_010--Hb_001504_140 Hb_001635_020 Hb_001635_020 Hb_144484_010--Hb_001635_020 Hb_001712_040 Hb_001712_040 Hb_144484_010--Hb_001712_040 Hb_000922_120 Hb_000922_120 Hb_144484_010--Hb_000922_120 Hb_000167_030 Hb_000167_030 Hb_144484_010--Hb_000167_030 Hb_012022_130--Hb_000922_120 Hb_023301_010 Hb_023301_010 Hb_012022_130--Hb_023301_010 Hb_012022_130--Hb_001712_040 Hb_012022_130--Hb_001504_140 Hb_000138_170 Hb_000138_170 Hb_012022_130--Hb_000138_170 Hb_005671_020 Hb_005671_020 Hb_001504_140--Hb_005671_020 Hb_001504_140--Hb_001635_020 Hb_002473_110 Hb_002473_110 Hb_001504_140--Hb_002473_110 Hb_011472_010 Hb_011472_010 Hb_001504_140--Hb_011472_010 Hb_158092_010 Hb_158092_010 Hb_001504_140--Hb_158092_010 Hb_000000_470 Hb_000000_470 Hb_001635_020--Hb_000000_470 Hb_005527_040 Hb_005527_040 Hb_001635_020--Hb_005527_040 Hb_000007_040 Hb_000007_040 Hb_001635_020--Hb_000007_040 Hb_005663_120 Hb_005663_120 Hb_001635_020--Hb_005663_120 Hb_007218_150 Hb_007218_150 Hb_001635_020--Hb_007218_150 Hb_001712_040--Hb_000922_120 Hb_002843_080 Hb_002843_080 Hb_001712_040--Hb_002843_080 Hb_002272_280 Hb_002272_280 Hb_001712_040--Hb_002272_280 Hb_001712_040--Hb_001504_140 Hb_000922_120--Hb_023301_010 Hb_001454_100 Hb_001454_100 Hb_000922_120--Hb_001454_100 Hb_000922_120--Hb_011472_010 Hb_000167_030--Hb_007218_150 Hb_009778_040 Hb_009778_040 Hb_000167_030--Hb_009778_040 Hb_116420_020 Hb_116420_020 Hb_000167_030--Hb_116420_020 Hb_000167_030--Hb_005663_120 Hb_001232_140 Hb_001232_140 Hb_000167_030--Hb_001232_140 Hb_032969_030 Hb_032969_030 Hb_000167_030--Hb_032969_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.43832 0.178833 0.688814 14.3576 0.139887 0.391849
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.3047 13.6832 21.0741 1.43803 1.2694

CAGE analysis