Hb_023301_010

Information

Type -
Description -
Location Contig23301: 20797-23239
Sequence    

Annotation

kegg
ID rcu:RCOM_0988670
description serine/threonine protein kinase, putative (EC:2.7.11.1)
nr
ID XP_012070178.1
description PREDICTED: serine/threonine-protein kinase AGC1-7 [Jatropha curcas]
swissprot
ID Q1PFB9
description Serine/threonine-protein kinase AGC1-7 OS=Arabidopsis thaliana GN=AGC1-7 PE=1 SV=1
trembl
ID A0A067L5R0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04245 PE=4 SV=1
Gene Ontology
ID GO:0004674
description serine threonine-protein kinase d6pk-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023301_010 0.0 - - PREDICTED: serine/threonine-protein kinase AGC1-7 [Jatropha curcas]
2 Hb_000922_120 0.1390882928 - - PREDICTED: carbonic anhydrase 2-like [Jatropha curcas]
3 Hb_012022_130 0.141912053 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
4 Hb_000210_100 0.2385818215 - - pepsin A, putative [Ricinus communis]
5 Hb_001454_100 0.2421854776 - - PREDICTED: protein RALF-like 33 [Jatropha curcas]
6 Hb_000179_120 0.2434071134 - - PREDICTED: corepressor interacting with RBPJ 1-like [Jatropha curcas]
7 Hb_000217_010 0.2548034098 - - hypothetical protein POPTR_0341s00210g [Populus trichocarpa]
8 Hb_144484_010 0.261818793 - - calcineurin-like phosphoesterase [Manihot esculenta]
9 Hb_003589_080 0.2673181045 - - PREDICTED: uncharacterized protein LOC105107863 [Populus euphratica]
10 Hb_000260_280 0.2763074482 - - auxin:hydrogen symporter, putative [Ricinus communis]
11 Hb_000138_170 0.2770155578 - - putative plastid-lipid-associated protein, partial [Hevea brasiliensis]
12 Hb_007120_040 0.2785179726 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000192_020 0.2795260703 - - hypothetical protein JCGZ_17351 [Jatropha curcas]
14 Hb_011472_010 0.2813437972 - - PREDICTED: protein yippee-like [Jatropha curcas]
15 Hb_001486_270 0.2814365088 - - Ann10 [Manihot esculenta]
16 Hb_001712_040 0.2882787773 - - Calmodulin, putative [Ricinus communis]
17 Hb_002272_280 0.2897621336 - - phosphoglycerate mutase, putative [Ricinus communis]
18 Hb_002316_010 0.2898725404 - - hypothetical protein JCGZ_11498 [Jatropha curcas]
19 Hb_001635_010 0.2967644756 - - -
20 Hb_019863_100 0.2977469565 - - PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial-like [Jatropha curcas]

Gene co-expression network

sample Hb_023301_010 Hb_023301_010 Hb_000922_120 Hb_000922_120 Hb_023301_010--Hb_000922_120 Hb_012022_130 Hb_012022_130 Hb_023301_010--Hb_012022_130 Hb_000210_100 Hb_000210_100 Hb_023301_010--Hb_000210_100 Hb_001454_100 Hb_001454_100 Hb_023301_010--Hb_001454_100 Hb_000179_120 Hb_000179_120 Hb_023301_010--Hb_000179_120 Hb_000217_010 Hb_000217_010 Hb_023301_010--Hb_000217_010 Hb_000922_120--Hb_012022_130 Hb_000922_120--Hb_001454_100 Hb_144484_010 Hb_144484_010 Hb_000922_120--Hb_144484_010 Hb_001712_040 Hb_001712_040 Hb_000922_120--Hb_001712_040 Hb_011472_010 Hb_011472_010 Hb_000922_120--Hb_011472_010 Hb_012022_130--Hb_144484_010 Hb_012022_130--Hb_001712_040 Hb_001504_140 Hb_001504_140 Hb_012022_130--Hb_001504_140 Hb_000138_170 Hb_000138_170 Hb_012022_130--Hb_000138_170 Hb_000210_100--Hb_001454_100 Hb_025466_020 Hb_025466_020 Hb_000210_100--Hb_025466_020 Hb_069355_010 Hb_069355_010 Hb_000210_100--Hb_069355_010 Hb_000260_280 Hb_000260_280 Hb_000210_100--Hb_000260_280 Hb_003878_050 Hb_003878_050 Hb_000210_100--Hb_003878_050 Hb_020805_140 Hb_020805_140 Hb_000210_100--Hb_020805_140 Hb_001454_100--Hb_025466_020 Hb_000310_100 Hb_000310_100 Hb_001454_100--Hb_000310_100 Hb_016564_010 Hb_016564_010 Hb_001454_100--Hb_016564_010 Hb_002154_110 Hb_002154_110 Hb_001454_100--Hb_002154_110 Hb_001454_100--Hb_000260_280 Hb_000179_120--Hb_000217_010 Hb_034299_070 Hb_034299_070 Hb_000179_120--Hb_034299_070 Hb_000345_060 Hb_000345_060 Hb_000179_120--Hb_000345_060 Hb_000483_400 Hb_000483_400 Hb_000179_120--Hb_000483_400 Hb_002572_030 Hb_002572_030 Hb_000179_120--Hb_002572_030 Hb_000240_100 Hb_000240_100 Hb_000217_010--Hb_000240_100 Hb_000217_010--Hb_000260_280 Hb_000192_020 Hb_000192_020 Hb_000217_010--Hb_000192_020 Hb_175933_010 Hb_175933_010 Hb_000217_010--Hb_175933_010 Hb_029920_020 Hb_029920_020 Hb_000217_010--Hb_029920_020 Hb_032972_010 Hb_032972_010 Hb_000217_010--Hb_032972_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.221274 0 0.101145 1.52254 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.469301 0.390951 0.778332 0.0259727 0.136893

CAGE analysis