Hb_000922_120

Information

Type -
Description -
Location Contig922: 147351-149852
Sequence    

Annotation

kegg
ID rcu:RCOM_1510600
description carbonic anhydrase, putative (EC:4.2.1.1)
nr
ID XP_012080069.1
description PREDICTED: carbonic anhydrase 2-like [Jatropha curcas]
swissprot
ID P16016
description Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
trembl
ID A0A067K4N4
description Carbonic anhydrase OS=Jatropha curcas GN=JCGZ_11478 PE=3 SV=1
Gene Ontology
ID GO:0004089
description carbonic anhydrase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62485: 147387-149679
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000922_120 0.0 - - PREDICTED: carbonic anhydrase 2-like [Jatropha curcas]
2 Hb_012022_130 0.118233615 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
3 Hb_023301_010 0.1390882928 - - PREDICTED: serine/threonine-protein kinase AGC1-7 [Jatropha curcas]
4 Hb_001454_100 0.1950785676 - - PREDICTED: protein RALF-like 33 [Jatropha curcas]
5 Hb_144484_010 0.1981270539 - - calcineurin-like phosphoesterase [Manihot esculenta]
6 Hb_001712_040 0.2116469385 - - Calmodulin, putative [Ricinus communis]
7 Hb_011472_010 0.216781212 - - PREDICTED: protein yippee-like [Jatropha curcas]
8 Hb_000217_010 0.2213667024 - - hypothetical protein POPTR_0341s00210g [Populus trichocarpa]
9 Hb_001504_140 0.2261603165 - - PREDICTED: deSI-like protein At4g17486 [Populus euphratica]
10 Hb_000210_100 0.2300528262 - - pepsin A, putative [Ricinus communis]
11 Hb_000138_170 0.2341261322 - - putative plastid-lipid-associated protein, partial [Hevea brasiliensis]
12 Hb_016564_010 0.2357632438 - - PREDICTED: uncharacterized protein LOC101764501 [Setaria italica]
13 Hb_002272_280 0.2414611058 - - phosphoglycerate mutase, putative [Ricinus communis]
14 Hb_000260_280 0.2483557587 - - auxin:hydrogen symporter, putative [Ricinus communis]
15 Hb_002843_080 0.2491294689 - - SAUR family protein [Theobroma cacao]
16 Hb_003589_080 0.2505263088 - - PREDICTED: uncharacterized protein LOC105107863 [Populus euphratica]
17 Hb_000179_120 0.2506078351 - - PREDICTED: corepressor interacting with RBPJ 1-like [Jatropha curcas]
18 Hb_024154_020 0.255220465 - - polyphenol oxidase [Hevea brasiliensis]
19 Hb_001377_420 0.2566786824 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001635_020 0.2648428826 - - PREDICTED: inorganic pyrophosphatase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000922_120 Hb_000922_120 Hb_012022_130 Hb_012022_130 Hb_000922_120--Hb_012022_130 Hb_023301_010 Hb_023301_010 Hb_000922_120--Hb_023301_010 Hb_001454_100 Hb_001454_100 Hb_000922_120--Hb_001454_100 Hb_144484_010 Hb_144484_010 Hb_000922_120--Hb_144484_010 Hb_001712_040 Hb_001712_040 Hb_000922_120--Hb_001712_040 Hb_011472_010 Hb_011472_010 Hb_000922_120--Hb_011472_010 Hb_012022_130--Hb_023301_010 Hb_012022_130--Hb_144484_010 Hb_012022_130--Hb_001712_040 Hb_001504_140 Hb_001504_140 Hb_012022_130--Hb_001504_140 Hb_000138_170 Hb_000138_170 Hb_012022_130--Hb_000138_170 Hb_000210_100 Hb_000210_100 Hb_023301_010--Hb_000210_100 Hb_023301_010--Hb_001454_100 Hb_000179_120 Hb_000179_120 Hb_023301_010--Hb_000179_120 Hb_000217_010 Hb_000217_010 Hb_023301_010--Hb_000217_010 Hb_001454_100--Hb_000210_100 Hb_025466_020 Hb_025466_020 Hb_001454_100--Hb_025466_020 Hb_000310_100 Hb_000310_100 Hb_001454_100--Hb_000310_100 Hb_016564_010 Hb_016564_010 Hb_001454_100--Hb_016564_010 Hb_002154_110 Hb_002154_110 Hb_001454_100--Hb_002154_110 Hb_000260_280 Hb_000260_280 Hb_001454_100--Hb_000260_280 Hb_144484_010--Hb_001504_140 Hb_001635_020 Hb_001635_020 Hb_144484_010--Hb_001635_020 Hb_144484_010--Hb_001712_040 Hb_000167_030 Hb_000167_030 Hb_144484_010--Hb_000167_030 Hb_002843_080 Hb_002843_080 Hb_001712_040--Hb_002843_080 Hb_002272_280 Hb_002272_280 Hb_001712_040--Hb_002272_280 Hb_001712_040--Hb_001504_140 Hb_012163_020 Hb_012163_020 Hb_011472_010--Hb_012163_020 Hb_000732_210 Hb_000732_210 Hb_011472_010--Hb_000732_210 Hb_007943_190 Hb_007943_190 Hb_011472_010--Hb_007943_190 Hb_001377_420 Hb_001377_420 Hb_011472_010--Hb_001377_420 Hb_011472_010--Hb_001504_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.887 0.29848 3.60328 91.9188 0.856816 1.91888
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
44.7943 26.6711 67.3861 6.84384 15.0487

CAGE analysis