Hb_002572_030

Information

Type -
Description -
Location Contig2572: 29404-30367
Sequence    

Annotation

kegg
ID rcu:RCOM_1602460
description protein binding protein, putative
nr
ID XP_012073539.1
description PREDICTED: diacylglycerol kinase theta [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KKV9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08013 PE=4 SV=1
Gene Ontology
ID GO:0008270
description diacylglycerol kinase theta

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26766: 29844-30209
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002572_030 0.0 - - PREDICTED: diacylglycerol kinase theta [Jatropha curcas]
2 Hb_000179_120 0.2423688018 - - PREDICTED: corepressor interacting with RBPJ 1-like [Jatropha curcas]
3 Hb_002157_040 0.2603978987 - - PREDICTED: uncharacterized protein LOC105628778 [Jatropha curcas]
4 Hb_001486_270 0.2628243006 - - Ann10 [Manihot esculenta]
5 Hb_003777_170 0.2628824088 - - conserved hypothetical protein [Ricinus communis]
6 Hb_124996_010 0.2635213812 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
7 Hb_000032_050 0.266330091 - - hypothetical protein RCOM_1691130 [Ricinus communis]
8 Hb_000922_120 0.2756556673 - - PREDICTED: carbonic anhydrase 2-like [Jatropha curcas]
9 Hb_000217_010 0.2842016026 - - hypothetical protein POPTR_0341s00210g [Populus trichocarpa]
10 Hb_000566_020 0.2864278001 - - hypothetical protein POPTR_0001s13520g [Populus trichocarpa]
11 Hb_024154_020 0.2868701314 - - polyphenol oxidase [Hevea brasiliensis]
12 Hb_000676_340 0.2899794152 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_175933_010 0.291286524 - - NADH-ubiquinone oxidoreductase 24 kD subunit, putative [Ricinus communis]
14 Hb_000260_280 0.2922074265 - - auxin:hydrogen symporter, putative [Ricinus communis]
15 Hb_006018_060 0.2971545543 - - Zinc finger SWIM domain-containing protein 7 isoform 1 [Theobroma cacao]
16 Hb_025466_020 0.3024873963 - - tubulin beta-6 [Brassica oleracea var. italica]
17 Hb_023301_010 0.3054000588 - - PREDICTED: serine/threonine-protein kinase AGC1-7 [Jatropha curcas]
18 Hb_111985_110 0.3079110486 - - thioredoxin H-type 3 [Hevea brasiliensis]
19 Hb_001638_180 0.3079224575 - - PREDICTED: D-arabinono-1,4-lactone oxidase-like [Jatropha curcas]
20 Hb_012022_130 0.3111477993 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]

Gene co-expression network

sample Hb_002572_030 Hb_002572_030 Hb_000179_120 Hb_000179_120 Hb_002572_030--Hb_000179_120 Hb_002157_040 Hb_002157_040 Hb_002572_030--Hb_002157_040 Hb_001486_270 Hb_001486_270 Hb_002572_030--Hb_001486_270 Hb_003777_170 Hb_003777_170 Hb_002572_030--Hb_003777_170 Hb_124996_010 Hb_124996_010 Hb_002572_030--Hb_124996_010 Hb_000032_050 Hb_000032_050 Hb_002572_030--Hb_000032_050 Hb_000217_010 Hb_000217_010 Hb_000179_120--Hb_000217_010 Hb_034299_070 Hb_034299_070 Hb_000179_120--Hb_034299_070 Hb_000345_060 Hb_000345_060 Hb_000179_120--Hb_000345_060 Hb_000483_400 Hb_000483_400 Hb_000179_120--Hb_000483_400 Hb_023301_010 Hb_023301_010 Hb_000179_120--Hb_023301_010 Hb_006018_060 Hb_006018_060 Hb_002157_040--Hb_006018_060 Hb_111985_110 Hb_111985_110 Hb_002157_040--Hb_111985_110 Hb_006573_290 Hb_006573_290 Hb_002157_040--Hb_006573_290 Hb_021409_080 Hb_021409_080 Hb_002157_040--Hb_021409_080 Hb_001019_150 Hb_001019_150 Hb_002157_040--Hb_001019_150 Hb_003581_300 Hb_003581_300 Hb_002157_040--Hb_003581_300 Hb_000260_280 Hb_000260_280 Hb_001486_270--Hb_000260_280 Hb_002228_080 Hb_002228_080 Hb_001486_270--Hb_002228_080 Hb_029920_020 Hb_029920_020 Hb_001486_270--Hb_029920_020 Hb_001597_050 Hb_001597_050 Hb_001486_270--Hb_001597_050 Hb_175933_010 Hb_175933_010 Hb_001486_270--Hb_175933_010 Hb_000192_020 Hb_000192_020 Hb_001486_270--Hb_000192_020 Hb_000166_060 Hb_000166_060 Hb_003777_170--Hb_000166_060 Hb_007120_040 Hb_007120_040 Hb_003777_170--Hb_007120_040 Hb_011472_010 Hb_011472_010 Hb_003777_170--Hb_011472_010 Hb_001930_090 Hb_001930_090 Hb_003777_170--Hb_001930_090 Hb_007553_010 Hb_007553_010 Hb_003777_170--Hb_007553_010 Hb_001288_030 Hb_001288_030 Hb_124996_010--Hb_001288_030 Hb_124996_010--Hb_002157_040 Hb_000162_220 Hb_000162_220 Hb_124996_010--Hb_000162_220 Hb_000307_120 Hb_000307_120 Hb_124996_010--Hb_000307_120 Hb_000007_200 Hb_000007_200 Hb_124996_010--Hb_000007_200 Hb_000072_210 Hb_000072_210 Hb_124996_010--Hb_000072_210 Hb_001922_180 Hb_001922_180 Hb_000032_050--Hb_001922_180 Hb_000445_170 Hb_000445_170 Hb_000032_050--Hb_000445_170 Hb_113739_010 Hb_113739_010 Hb_000032_050--Hb_113739_010 Hb_000109_230 Hb_000109_230 Hb_000032_050--Hb_000109_230 Hb_033354_020 Hb_033354_020 Hb_000032_050--Hb_033354_020 Hb_001828_100 Hb_001828_100 Hb_000032_050--Hb_001828_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.19184 0.185984 0.365843 5.70563 0 0.0308428
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.64853 1.00301 1.30498 0.462766 0.676229

CAGE analysis