Hb_000007_200

Information

Type -
Description -
Location Contig7: 212220-220544
Sequence    

Annotation

kegg
ID tcc:TCM_011351
description Aminoalcoholphosphotransferase 1 isoform 1
nr
ID XP_012081980.1
description PREDICTED: choline/ethanolaminephosphotransferase 1 [Jatropha curcas]
swissprot
ID O82567
description Choline/ethanolaminephosphotransferase 1 OS=Arabidopsis thaliana GN=AAPT1 PE=1 SV=1
trembl
ID A0A067JZM2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18243 PE=3 SV=1
Gene Ontology
ID GO:0016020
description choline ethanolaminephosphotransferase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54748: 212248-212380 , PASA_asmbl_54749: 219416-219959
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000007_200 0.0 - - PREDICTED: choline/ethanolaminephosphotransferase 1 [Jatropha curcas]
2 Hb_012807_130 0.1042335453 - - PREDICTED: lactoylglutathione lyase [Jatropha curcas]
3 Hb_004007_110 0.1308310084 - - PREDICTED: mitochondrial outer membrane protein porin 2-like [Jatropha curcas]
4 Hb_001998_200 0.1344346092 - - UDP-glucose 4-epimerase, putative [Ricinus communis]
5 Hb_000012_110 0.1416273407 - - hypothetical protein CICLE_v10008613mg [Citrus clementina]
6 Hb_029920_060 0.1439274298 - - PREDICTED: UPF0554 protein-like isoform X2 [Jatropha curcas]
7 Hb_000139_470 0.147313721 - - Dual specificity protein phosphatase, putative [Ricinus communis]
8 Hb_000645_200 0.1482707654 - - PREDICTED: GTP-binding protein SAR1A [Jatropha curcas]
9 Hb_012305_130 0.1521745933 - - PREDICTED: GTP-binding protein SAR1A [Jatropha curcas]
10 Hb_000062_660 0.1541821277 - - hypothetical protein POPTR_0009s03470g [Populus trichocarpa]
11 Hb_007590_090 0.1549546118 - - PREDICTED: O-glucosyltransferase rumi [Jatropha curcas]
12 Hb_002301_160 0.1576354588 - - PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like [Jatropha curcas]
13 Hb_000407_070 0.1590255891 - - PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Jatropha curcas]
14 Hb_000288_020 0.1593397829 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000590_120 0.1643772783 - - dehydroascorbate reductase, putative [Ricinus communis]
16 Hb_010997_090 0.1644623791 transcription factor TF Family: mTERF hypothetical protein PRUPE_ppa019510mg, partial [Prunus persica]
17 Hb_048476_060 0.1654486303 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Jatropha curcas]
18 Hb_000110_120 0.1655229278 - - PREDICTED: ras-related protein RABE1a [Fragaria vesca subsp. vesca]
19 Hb_021409_080 0.1665064193 - - PREDICTED: ORM1-like protein 1 [Jatropha curcas]
20 Hb_006573_290 0.1669790235 - - PREDICTED: reticulon-like protein B5 [Jatropha curcas]

Gene co-expression network

sample Hb_000007_200 Hb_000007_200 Hb_012807_130 Hb_012807_130 Hb_000007_200--Hb_012807_130 Hb_004007_110 Hb_004007_110 Hb_000007_200--Hb_004007_110 Hb_001998_200 Hb_001998_200 Hb_000007_200--Hb_001998_200 Hb_000012_110 Hb_000012_110 Hb_000007_200--Hb_000012_110 Hb_029920_060 Hb_029920_060 Hb_000007_200--Hb_029920_060 Hb_000139_470 Hb_000139_470 Hb_000007_200--Hb_000139_470 Hb_007590_090 Hb_007590_090 Hb_012807_130--Hb_007590_090 Hb_012807_130--Hb_004007_110 Hb_000648_050 Hb_000648_050 Hb_012807_130--Hb_000648_050 Hb_012807_130--Hb_001998_200 Hb_000645_200 Hb_000645_200 Hb_012807_130--Hb_000645_200 Hb_004007_110--Hb_000012_110 Hb_004007_110--Hb_007590_090 Hb_002110_100 Hb_002110_100 Hb_004007_110--Hb_002110_100 Hb_004158_020 Hb_004158_020 Hb_004007_110--Hb_004158_020 Hb_028049_010 Hb_028049_010 Hb_004007_110--Hb_028049_010 Hb_012305_130 Hb_012305_130 Hb_004007_110--Hb_012305_130 Hb_001998_200--Hb_000012_110 Hb_001998_200--Hb_007590_090 Hb_001817_100 Hb_001817_100 Hb_001998_200--Hb_001817_100 Hb_001998_200--Hb_004007_110 Hb_002615_030 Hb_002615_030 Hb_001998_200--Hb_002615_030 Hb_003602_060 Hb_003602_060 Hb_001998_200--Hb_003602_060 Hb_000012_110--Hb_002615_030 Hb_000012_110--Hb_007590_090 Hb_000012_110--Hb_003602_060 Hb_015057_020 Hb_015057_020 Hb_000012_110--Hb_015057_020 Hb_001619_060 Hb_001619_060 Hb_029920_060--Hb_001619_060 Hb_001486_040 Hb_001486_040 Hb_029920_060--Hb_001486_040 Hb_185830_060 Hb_185830_060 Hb_029920_060--Hb_185830_060 Hb_001301_280 Hb_001301_280 Hb_029920_060--Hb_001301_280 Hb_000365_010 Hb_000365_010 Hb_029920_060--Hb_000365_010 Hb_020390_010 Hb_020390_010 Hb_029920_060--Hb_020390_010 Hb_001728_040 Hb_001728_040 Hb_000139_470--Hb_001728_040 Hb_000847_060 Hb_000847_060 Hb_000139_470--Hb_000847_060 Hb_002301_160 Hb_002301_160 Hb_000139_470--Hb_002301_160 Hb_006538_090 Hb_006538_090 Hb_000139_470--Hb_006538_090 Hb_000155_160 Hb_000155_160 Hb_000139_470--Hb_000155_160 Hb_002239_050 Hb_002239_050 Hb_000139_470--Hb_002239_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.511359 4.02306 3.7934 10.7984 0.495611 0.91011
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.45795 6.26805 2.35478 2.6834 4.82377

CAGE analysis