Hb_012807_130

Information

Type -
Description -
Location Contig12807: 134613-140664
Sequence    

Annotation

kegg
ID rcu:RCOM_0473450
description lactoylglutathione lyase, putative (EC:4.4.1.5)
nr
ID XP_012064721.1
description PREDICTED: lactoylglutathione lyase [Jatropha curcas]
swissprot
ID O49818
description Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1
trembl
ID B9SCI1
description Lactoylglutathione lyase OS=Ricinus communis GN=RCOM_0473450 PE=3 SV=1
Gene Ontology
ID GO:0005829
description lactoylglutathione lyase isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08684: 134671-140762 , PASA_asmbl_08685: 134671-140766
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012807_130 0.0 - - PREDICTED: lactoylglutathione lyase [Jatropha curcas]
2 Hb_000007_200 0.1042335453 - - PREDICTED: choline/ethanolaminephosphotransferase 1 [Jatropha curcas]
3 Hb_007590_090 0.1208308439 - - PREDICTED: O-glucosyltransferase rumi [Jatropha curcas]
4 Hb_004007_110 0.1347472205 - - PREDICTED: mitochondrial outer membrane protein porin 2-like [Jatropha curcas]
5 Hb_000648_050 0.1376541436 - - PREDICTED: putative methylesterase 14, chloroplastic [Jatropha curcas]
6 Hb_001998_200 0.1405469985 - - UDP-glucose 4-epimerase, putative [Ricinus communis]
7 Hb_000645_200 0.1448470015 - - PREDICTED: GTP-binding protein SAR1A [Jatropha curcas]
8 Hb_000139_470 0.1494102182 - - Dual specificity protein phosphatase, putative [Ricinus communis]
9 Hb_000012_110 0.1531875317 - - hypothetical protein CICLE_v10008613mg [Citrus clementina]
10 Hb_172632_050 0.1573710293 - - PREDICTED: uncharacterized protein LOC105646134 [Jatropha curcas]
11 Hb_000889_010 0.1578421054 transcription factor TF Family: MYB-related hypothetical protein PRUPE_ppa014728mg [Prunus persica]
12 Hb_000317_420 0.1613032293 - - PREDICTED: extradiol ring-cleavage dioxygenase [Jatropha curcas]
13 Hb_012305_130 0.1621397042 - - PREDICTED: GTP-binding protein SAR1A [Jatropha curcas]
14 Hb_000529_280 0.1624252189 - - PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Jatropha curcas]
15 Hb_001817_100 0.1634280877 - - PREDICTED: deoxyhypusine hydroxylase [Jatropha curcas]
16 Hb_009898_040 0.1637338178 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000684_520 0.1682168836 - - glutathione S-transferase L3-like [Jatropha curcas]
18 Hb_002249_070 0.1694727868 - - gcn4-complementing protein, putative [Ricinus communis]
19 Hb_000270_180 0.1705699621 - - PREDICTED: HIPL1 protein-like [Jatropha curcas]
20 Hb_015057_020 0.1706816367 - - PREDICTED: E3 SUMO-protein ligase MMS21 [Jatropha curcas]

Gene co-expression network

sample Hb_012807_130 Hb_012807_130 Hb_000007_200 Hb_000007_200 Hb_012807_130--Hb_000007_200 Hb_007590_090 Hb_007590_090 Hb_012807_130--Hb_007590_090 Hb_004007_110 Hb_004007_110 Hb_012807_130--Hb_004007_110 Hb_000648_050 Hb_000648_050 Hb_012807_130--Hb_000648_050 Hb_001998_200 Hb_001998_200 Hb_012807_130--Hb_001998_200 Hb_000645_200 Hb_000645_200 Hb_012807_130--Hb_000645_200 Hb_000007_200--Hb_004007_110 Hb_000007_200--Hb_001998_200 Hb_000012_110 Hb_000012_110 Hb_000007_200--Hb_000012_110 Hb_029920_060 Hb_029920_060 Hb_000007_200--Hb_029920_060 Hb_000139_470 Hb_000139_470 Hb_000007_200--Hb_000139_470 Hb_001817_100 Hb_001817_100 Hb_007590_090--Hb_001817_100 Hb_002615_030 Hb_002615_030 Hb_007590_090--Hb_002615_030 Hb_007590_090--Hb_004007_110 Hb_007590_090--Hb_001998_200 Hb_007590_090--Hb_000012_110 Hb_002217_100 Hb_002217_100 Hb_007590_090--Hb_002217_100 Hb_004007_110--Hb_000012_110 Hb_002110_100 Hb_002110_100 Hb_004007_110--Hb_002110_100 Hb_004158_020 Hb_004158_020 Hb_004007_110--Hb_004158_020 Hb_028049_010 Hb_028049_010 Hb_004007_110--Hb_028049_010 Hb_012305_130 Hb_012305_130 Hb_004007_110--Hb_012305_130 Hb_000270_180 Hb_000270_180 Hb_000648_050--Hb_000270_180 Hb_000648_050--Hb_007590_090 Hb_002486_080 Hb_002486_080 Hb_000648_050--Hb_002486_080 Hb_000017_260 Hb_000017_260 Hb_000648_050--Hb_000017_260 Hb_000648_050--Hb_001817_100 Hb_000009_520 Hb_000009_520 Hb_000648_050--Hb_000009_520 Hb_001998_200--Hb_000012_110 Hb_001998_200--Hb_001817_100 Hb_001998_200--Hb_004007_110 Hb_001998_200--Hb_002615_030 Hb_003602_060 Hb_003602_060 Hb_001998_200--Hb_003602_060 Hb_000012_240 Hb_000012_240 Hb_000645_200--Hb_000012_240 Hb_000529_280 Hb_000529_280 Hb_000645_200--Hb_000529_280 Hb_093458_010 Hb_093458_010 Hb_000645_200--Hb_093458_010 Hb_001728_020 Hb_001728_020 Hb_000645_200--Hb_001728_020 Hb_002450_030 Hb_002450_030 Hb_000645_200--Hb_002450_030 Hb_027654_080 Hb_027654_080 Hb_000645_200--Hb_027654_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.10641 44.2056 42.4719 107.113 2.26717 8.17926
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
60.5188 61.3208 26.5081 56.7578 40.0055

CAGE analysis