Hb_000007_040

Information

Type -
Description -
Location Contig7: 64851-65274
Sequence    

Annotation

kegg
ID aly:ARALYDRAFT_894668
description hypothetical protein
nr
ID EYU28917.1
description hypothetical protein MIMGU_mgv1a017616mg [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID A0A022QJN0
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017616mg PE=4 SV=1
Gene Ontology
ID GO:0005737
description chaperonin 60 subunit beta 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000007_040 0.0 - - hypothetical protein MIMGU_mgv1a017616mg [Erythranthe guttata]
2 Hb_004650_100 0.1530905958 - - Ubiquitin-fold modifier 1 precursor, putative [Ricinus communis]
3 Hb_002233_120 0.1699897134 - - -
4 Hb_002473_110 0.175059069 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
5 Hb_002828_040 0.1823644724 - - transmembrane protein, putative [Medicago truncatula]
6 Hb_001635_020 0.1832139482 - - PREDICTED: inorganic pyrophosphatase 1-like [Jatropha curcas]
7 Hb_000367_030 0.1889280104 - - hypothetical protein POPTR_0015s06690g [Populus trichocarpa]
8 Hb_006570_070 0.1970259067 - - cyclophilin [Hevea brasiliensis]
9 Hb_029904_040 0.200186904 - - putative aspartate aminotransferase protein, partial [Elaeis guineensis]
10 Hb_054074_010 0.2017506187 - - PREDICTED: uncharacterized protein LOC105645601 [Jatropha curcas]
11 Hb_030565_130 0.2037160598 - - hypothetical protein JCGZ_01083 [Jatropha curcas]
12 Hb_005527_040 0.2039739169 - - PREDICTED: methionine adenosyltransferase 2 subunit beta [Jatropha curcas]
13 Hb_004128_110 0.2053645917 - - glutathione S-transferase L3-like [Jatropha curcas]
14 Hb_001307_090 0.2107657797 - - hypothetical protein CISIN_1g0263261mg [Citrus sinensis]
15 Hb_006538_140 0.2109476312 - - PREDICTED: uncharacterized protein LOC103341483 [Prunus mume]
16 Hb_003581_300 0.2145615406 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105630404 isoform X1 [Jatropha curcas]
17 Hb_008699_020 0.2151254887 - - eukaryotic translation initiation factor 5A isoform IV [Hevea brasiliensis]
18 Hb_023386_010 0.2169165165 - - PREDICTED: histidine triad nucleotide-binding protein 3 [Jatropha curcas]
19 Hb_002025_300 0.2178502797 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Jatropha curcas]
20 Hb_001427_230 0.2201533969 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000007_040 Hb_000007_040 Hb_004650_100 Hb_004650_100 Hb_000007_040--Hb_004650_100 Hb_002233_120 Hb_002233_120 Hb_000007_040--Hb_002233_120 Hb_002473_110 Hb_002473_110 Hb_000007_040--Hb_002473_110 Hb_002828_040 Hb_002828_040 Hb_000007_040--Hb_002828_040 Hb_001635_020 Hb_001635_020 Hb_000007_040--Hb_001635_020 Hb_000367_030 Hb_000367_030 Hb_000007_040--Hb_000367_030 Hb_000922_100 Hb_000922_100 Hb_004650_100--Hb_000922_100 Hb_002659_040 Hb_002659_040 Hb_004650_100--Hb_002659_040 Hb_001700_020 Hb_001700_020 Hb_004650_100--Hb_001700_020 Hb_001427_230 Hb_001427_230 Hb_004650_100--Hb_001427_230 Hb_183086_040 Hb_183086_040 Hb_004650_100--Hb_183086_040 Hb_080477_060 Hb_080477_060 Hb_002233_120--Hb_080477_060 Hb_005128_040 Hb_005128_040 Hb_002233_120--Hb_005128_040 Hb_002233_120--Hb_004650_100 Hb_030954_020 Hb_030954_020 Hb_002233_120--Hb_030954_020 Hb_001623_430 Hb_001623_430 Hb_002233_120--Hb_001623_430 Hb_004128_110 Hb_004128_110 Hb_002473_110--Hb_004128_110 Hb_002636_080 Hb_002636_080 Hb_002473_110--Hb_002636_080 Hb_006570_070 Hb_006570_070 Hb_002473_110--Hb_006570_070 Hb_004931_100 Hb_004931_100 Hb_002473_110--Hb_004931_100 Hb_000318_100 Hb_000318_100 Hb_002473_110--Hb_000318_100 Hb_029904_040 Hb_029904_040 Hb_002828_040--Hb_029904_040 Hb_002828_040--Hb_001700_020 Hb_008699_020 Hb_008699_020 Hb_002828_040--Hb_008699_020 Hb_009113_050 Hb_009113_050 Hb_002828_040--Hb_009113_050 Hb_000836_140 Hb_000836_140 Hb_002828_040--Hb_000836_140 Hb_000329_250 Hb_000329_250 Hb_002828_040--Hb_000329_250 Hb_000000_470 Hb_000000_470 Hb_001635_020--Hb_000000_470 Hb_005527_040 Hb_005527_040 Hb_001635_020--Hb_005527_040 Hb_144484_010 Hb_144484_010 Hb_001635_020--Hb_144484_010 Hb_005663_120 Hb_005663_120 Hb_001635_020--Hb_005663_120 Hb_007218_150 Hb_007218_150 Hb_001635_020--Hb_007218_150 Hb_006718_010 Hb_006718_010 Hb_000367_030--Hb_006718_010 Hb_006541_020 Hb_006541_020 Hb_000367_030--Hb_006541_020 Hb_002843_210 Hb_002843_210 Hb_000367_030--Hb_002843_210 Hb_005245_070 Hb_005245_070 Hb_000367_030--Hb_005245_070 Hb_000025_240 Hb_000025_240 Hb_000367_030--Hb_000025_240 Hb_007520_060 Hb_007520_060 Hb_000367_030--Hb_007520_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.2973 0.97439 0.462357 12.9542 1.37235 5.01011
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
38.6993 14.6796 12.1758 10.2025 1.78684

CAGE analysis