Hb_000703_210

Information

Type -
Description -
Location Contig703: 213599-223050
Sequence    

Annotation

kegg
ID csv:101204636
description inactive protein kinase SELMODRAFT_444075-like
nr
ID KHG20383.1
description Inactive protein kinase [Gossypium arboreum]
swissprot
ID P0DH62
description Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1
trembl
ID A0A0B0P0Z4
description Inactive protein kinase OS=Gossypium arboreum GN=F383_24280 PE=4 SV=1
Gene Ontology
ID GO:0005886
description serine threonine-protein kinase cdl1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54952: 213660-214382
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000703_210 0.0 - - Inactive protein kinase [Gossypium arboreum]
2 Hb_001492_010 0.0971756226 - - PREDICTED: diacylglycerol kinase 3-like isoform X2 [Populus euphratica]
3 Hb_001369_350 0.104821132 - - Cisplatin resistance-associated overexpressed protein, putative [Ricinus communis]
4 Hb_003050_370 0.1114673874 - - mitochondrial inner membrane protease subunit, putative [Ricinus communis]
5 Hb_006478_060 0.1115601525 - - PREDICTED: homocysteine S-methyltransferase 2 isoform X1 [Jatropha curcas]
6 Hb_001085_320 0.1155513531 transcription factor TF Family: LUG WD-repeat protein, putative [Ricinus communis]
7 Hb_002374_320 0.1158639058 - - hypothetical protein JCGZ_12107 [Jatropha curcas]
8 Hb_080313_010 0.1159374587 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
9 Hb_004974_010 0.116616078 - - PREDICTED: F-box/kelch-repeat protein At3g23880-like [Prunus mume]
10 Hb_073973_160 0.1169738789 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]
11 Hb_003894_040 0.1230192449 - - nucleotide binding protein, putative [Ricinus communis]
12 Hb_001454_320 0.123246004 - - PREDICTED: protein pleiotropic regulatory locus 1 isoform X1 [Jatropha curcas]
13 Hb_002837_060 0.1244898417 - - PREDICTED: uncharacterized protein At1g10890-like [Nelumbo nucifera]
14 Hb_005333_030 0.1260817583 - - hypothetical protein JCGZ_15866 [Jatropha curcas]
15 Hb_000959_250 0.1262518168 - - PREDICTED: ribonucleoside-diphosphate reductase large subunit [Jatropha curcas]
16 Hb_000158_130 0.126434518 - - PREDICTED: uncharacterized protein LOC105647950 isoform X1 [Jatropha curcas]
17 Hb_000648_100 0.1265993352 - - PREDICTED: transcription initiation factor IIA large subunit [Jatropha curcas]
18 Hb_012023_020 0.1273993704 - - hypothetical protein JCGZ_03076 [Jatropha curcas]
19 Hb_000120_620 0.1301941341 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1a isoform X1 [Jatropha curcas]
20 Hb_008143_070 0.1309697296 - - PREDICTED: factor of DNA methylation 4 [Jatropha curcas]

Gene co-expression network

sample Hb_000703_210 Hb_000703_210 Hb_001492_010 Hb_001492_010 Hb_000703_210--Hb_001492_010 Hb_001369_350 Hb_001369_350 Hb_000703_210--Hb_001369_350 Hb_003050_370 Hb_003050_370 Hb_000703_210--Hb_003050_370 Hb_006478_060 Hb_006478_060 Hb_000703_210--Hb_006478_060 Hb_001085_320 Hb_001085_320 Hb_000703_210--Hb_001085_320 Hb_002374_320 Hb_002374_320 Hb_000703_210--Hb_002374_320 Hb_001454_320 Hb_001454_320 Hb_001492_010--Hb_001454_320 Hb_000215_190 Hb_000215_190 Hb_001492_010--Hb_000215_190 Hb_000120_620 Hb_000120_620 Hb_001492_010--Hb_000120_620 Hb_000331_160 Hb_000331_160 Hb_001492_010--Hb_000331_160 Hb_000160_290 Hb_000160_290 Hb_001492_010--Hb_000160_290 Hb_003124_130 Hb_003124_130 Hb_001492_010--Hb_003124_130 Hb_001178_150 Hb_001178_150 Hb_001369_350--Hb_001178_150 Hb_000935_090 Hb_000935_090 Hb_001369_350--Hb_000935_090 Hb_010925_020 Hb_010925_020 Hb_001369_350--Hb_010925_020 Hb_002307_350 Hb_002307_350 Hb_001369_350--Hb_002307_350 Hb_001369_350--Hb_000120_620 Hb_000025_650 Hb_000025_650 Hb_001369_350--Hb_000025_650 Hb_003050_370--Hb_001085_320 Hb_073973_160 Hb_073973_160 Hb_003050_370--Hb_073973_160 Hb_000868_060 Hb_000868_060 Hb_003050_370--Hb_000868_060 Hb_000785_030 Hb_000785_030 Hb_003050_370--Hb_000785_030 Hb_001894_030 Hb_001894_030 Hb_003050_370--Hb_001894_030 Hb_000959_250 Hb_000959_250 Hb_003050_370--Hb_000959_250 Hb_006478_060--Hb_002374_320 Hb_010053_030 Hb_010053_030 Hb_006478_060--Hb_010053_030 Hb_011930_080 Hb_011930_080 Hb_006478_060--Hb_011930_080 Hb_000923_080 Hb_000923_080 Hb_006478_060--Hb_000923_080 Hb_001621_130 Hb_001621_130 Hb_006478_060--Hb_001621_130 Hb_174821_010 Hb_174821_010 Hb_006478_060--Hb_174821_010 Hb_030131_040 Hb_030131_040 Hb_001085_320--Hb_030131_040 Hb_001085_320--Hb_000868_060 Hb_000059_140 Hb_000059_140 Hb_001085_320--Hb_000059_140 Hb_015763_030 Hb_015763_030 Hb_001085_320--Hb_015763_030 Hb_007558_120 Hb_007558_120 Hb_001085_320--Hb_007558_120 Hb_001085_320--Hb_001454_320 Hb_002374_320--Hb_011930_080 Hb_001832_130 Hb_001832_130 Hb_002374_320--Hb_001832_130 Hb_001307_080 Hb_001307_080 Hb_002374_320--Hb_001307_080 Hb_000406_230 Hb_000406_230 Hb_002374_320--Hb_000406_230 Hb_003040_020 Hb_003040_020 Hb_002374_320--Hb_003040_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.88431 6.59397 4.34988 7.015 9.13064 9.87097
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.39625 1.88139 0.931756 6.43717 1.90138

CAGE analysis