Hb_011930_080

Information

Type -
Description -
Location Contig11930: 61184-69383
Sequence    

Annotation

kegg
ID rcu:RCOM_0698810
description hypothetical protein
nr
ID XP_012091965.1
description PREDICTED: uncharacterized protein LOC105649790 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JES6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21714 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05710: 61802-69032
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011930_080 0.0 - - PREDICTED: uncharacterized protein LOC105649790 [Jatropha curcas]
2 Hb_001427_190 0.051266689 - - PREDICTED: histone acetyltransferase type B catalytic subunit [Jatropha curcas]
3 Hb_002374_320 0.0555378609 - - hypothetical protein JCGZ_12107 [Jatropha curcas]
4 Hb_019654_040 0.0630143569 - - PREDICTED: putative tRNA pseudouridine synthase Pus10 isoform X2 [Jatropha curcas]
5 Hb_000648_100 0.0634531605 - - PREDICTED: transcription initiation factor IIA large subunit [Jatropha curcas]
6 Hb_002078_100 0.0676698755 - - PREDICTED: mannosyl-oligosaccharide glucosidase GCS1-like [Jatropha curcas]
7 Hb_002888_070 0.0701538778 - - PREDICTED: tubulin-folding cofactor E isoform X1 [Pyrus x bretschneideri]
8 Hb_001935_110 0.0710423412 - - PREDICTED: T-complex protein 1 subunit alpha [Jatropha curcas]
9 Hb_174821_010 0.0726040771 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 14 [Jatropha curcas]
10 Hb_032278_020 0.077001304 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1 [Jatropha curcas]
11 Hb_000470_070 0.0774629353 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP43-like [Jatropha curcas]
12 Hb_001307_080 0.0775534619 - - PREDICTED: phospholipid--sterol O-acyltransferase [Jatropha curcas]
13 Hb_000923_080 0.0776442863 - - PREDICTED: eukaryotic translation initiation factor 2A [Jatropha curcas]
14 Hb_000960_050 0.0794884542 - - PREDICTED: protein EXPORTIN 1A [Jatropha curcas]
15 Hb_006478_060 0.0800053267 - - PREDICTED: homocysteine S-methyltransferase 2 isoform X1 [Jatropha curcas]
16 Hb_005053_010 0.0812726928 - - PREDICTED: protease Do-like 9 [Jatropha curcas]
17 Hb_000086_560 0.0813251795 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase SUVR2 isoform X2 [Jatropha curcas]
18 Hb_001832_130 0.082600558 - - PREDICTED: WD-40 repeat-containing protein MSI4 [Jatropha curcas]
19 Hb_001454_320 0.0839346407 - - PREDICTED: protein pleiotropic regulatory locus 1 isoform X1 [Jatropha curcas]
20 Hb_000152_260 0.0845258297 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 1 [Jatropha curcas]

Gene co-expression network

sample Hb_011930_080 Hb_011930_080 Hb_001427_190 Hb_001427_190 Hb_011930_080--Hb_001427_190 Hb_002374_320 Hb_002374_320 Hb_011930_080--Hb_002374_320 Hb_019654_040 Hb_019654_040 Hb_011930_080--Hb_019654_040 Hb_000648_100 Hb_000648_100 Hb_011930_080--Hb_000648_100 Hb_002078_100 Hb_002078_100 Hb_011930_080--Hb_002078_100 Hb_002888_070 Hb_002888_070 Hb_011930_080--Hb_002888_070 Hb_001935_110 Hb_001935_110 Hb_001427_190--Hb_001935_110 Hb_000152_260 Hb_000152_260 Hb_001427_190--Hb_000152_260 Hb_001427_190--Hb_019654_040 Hb_001427_190--Hb_002078_100 Hb_001427_190--Hb_002888_070 Hb_006478_060 Hb_006478_060 Hb_002374_320--Hb_006478_060 Hb_001832_130 Hb_001832_130 Hb_002374_320--Hb_001832_130 Hb_001307_080 Hb_001307_080 Hb_002374_320--Hb_001307_080 Hb_000406_230 Hb_000406_230 Hb_002374_320--Hb_000406_230 Hb_003040_020 Hb_003040_020 Hb_002374_320--Hb_003040_020 Hb_000470_070 Hb_000470_070 Hb_019654_040--Hb_000470_070 Hb_009296_010 Hb_009296_010 Hb_019654_040--Hb_009296_010 Hb_019654_040--Hb_001935_110 Hb_019654_040--Hb_000648_100 Hb_001488_200 Hb_001488_200 Hb_019654_040--Hb_001488_200 Hb_000648_100--Hb_000470_070 Hb_000648_100--Hb_002078_100 Hb_001454_320 Hb_001454_320 Hb_000648_100--Hb_001454_320 Hb_000923_080 Hb_000923_080 Hb_000648_100--Hb_000923_080 Hb_001140_350 Hb_001140_350 Hb_000648_100--Hb_001140_350 Hb_002078_100--Hb_000470_070 Hb_002078_100--Hb_009296_010 Hb_174821_010 Hb_174821_010 Hb_002078_100--Hb_174821_010 Hb_000109_100 Hb_000109_100 Hb_002078_100--Hb_000109_100 Hb_002078_100--Hb_019654_040 Hb_000868_060 Hb_000868_060 Hb_002888_070--Hb_000868_060 Hb_003126_100 Hb_003126_100 Hb_002888_070--Hb_003126_100 Hb_000480_010 Hb_000480_010 Hb_002888_070--Hb_000480_010 Hb_000914_080 Hb_000914_080 Hb_002888_070--Hb_000914_080 Hb_001102_080 Hb_001102_080 Hb_002888_070--Hb_001102_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
36.6864 31.6095 35.582 20.7803 50.4241 56.6946
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.1453 12.528 15.4211 36.3292 19.2757

CAGE analysis