Hb_000684_050

Information

Type -
Description -
Location Contig684: 117869-121098
Sequence    

Annotation

kegg
ID vvi:100233063
description MLO11, MLO3; MLO11 protein
nr
ID XP_011089887.1
description PREDICTED: MLO-like protein 6 [Sesamum indicum]
swissprot
ID O80961
description MLO-like protein 12 OS=Arabidopsis thaliana GN=MLO12 PE=2 SV=2
trembl
ID C6EWE6
description MLO-like protein OS=Vitis vinifera GN=MLO3 PE=2 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53963: 118523-118853
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000684_050 0.0 - - PREDICTED: MLO-like protein 6 [Sesamum indicum]
2 Hb_001404_090 0.1350644249 - - PREDICTED: kinesin-like protein NACK2 [Camelina sativa]
3 Hb_001124_140 0.1589463531 - - PREDICTED: inactive beta-amylase 9 [Jatropha curcas]
4 Hb_005305_120 0.1593725385 - - PREDICTED: calcium-dependent protein kinase 8-like [Jatropha curcas]
5 Hb_001230_030 0.1597478726 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 isoform X2 [Populus euphratica]
6 Hb_006816_480 0.1603419239 - - PREDICTED: F-box/LRR-repeat protein 3 isoform X1 [Jatropha curcas]
7 Hb_000416_060 0.1609118761 - - PREDICTED: uncharacterized protein LOC105649718 [Jatropha curcas]
8 Hb_000331_510 0.1611639359 - - PREDICTED: peroxisome biogenesis factor 10-like [Jatropha curcas]
9 Hb_004837_150 0.1628609021 - - hypothetical protein POPTR_0001s26540g [Populus trichocarpa]
10 Hb_007850_010 0.1640178416 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.4 [Jatropha curcas]
11 Hb_001123_150 0.1688024807 transcription factor TF Family: NAC NAC transcription factor [Hevea brasiliensis]
12 Hb_029695_120 0.1723586675 - - hypothetical protein POPTR_0002s05320g [Populus trichocarpa]
13 Hb_007218_160 0.1763404406 - - PREDICTED: uncharacterized protein LOC105108358 [Populus euphratica]
14 Hb_003581_130 0.1770628827 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
15 Hb_005588_120 0.1775897657 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001699_170 0.1785886092 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002349_030 0.1791974317 - - conserved hypothetical protein [Ricinus communis]
18 Hb_024714_070 0.1796712297 - - PREDICTED: uncharacterized protein LOC105642502 [Jatropha curcas]
19 Hb_000340_290 0.1799233018 - - PREDICTED: piezo-type mechanosensitive ion channel homolog [Jatropha curcas]
20 Hb_001969_130 0.1801202299 - - PREDICTED: molybdate transporter 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000684_050 Hb_000684_050 Hb_001404_090 Hb_001404_090 Hb_000684_050--Hb_001404_090 Hb_001124_140 Hb_001124_140 Hb_000684_050--Hb_001124_140 Hb_005305_120 Hb_005305_120 Hb_000684_050--Hb_005305_120 Hb_001230_030 Hb_001230_030 Hb_000684_050--Hb_001230_030 Hb_006816_480 Hb_006816_480 Hb_000684_050--Hb_006816_480 Hb_000416_060 Hb_000416_060 Hb_000684_050--Hb_000416_060 Hb_001404_090--Hb_000416_060 Hb_000094_150 Hb_000094_150 Hb_001404_090--Hb_000094_150 Hb_132840_030 Hb_132840_030 Hb_001404_090--Hb_132840_030 Hb_005588_120 Hb_005588_120 Hb_001404_090--Hb_005588_120 Hb_001307_200 Hb_001307_200 Hb_001404_090--Hb_001307_200 Hb_073973_020 Hb_073973_020 Hb_001404_090--Hb_073973_020 Hb_005731_100 Hb_005731_100 Hb_001124_140--Hb_005731_100 Hb_001969_130 Hb_001969_130 Hb_001124_140--Hb_001969_130 Hb_022425_050 Hb_022425_050 Hb_001124_140--Hb_022425_050 Hb_002026_030 Hb_002026_030 Hb_001124_140--Hb_002026_030 Hb_001865_010 Hb_001865_010 Hb_001124_140--Hb_001865_010 Hb_004129_010 Hb_004129_010 Hb_001124_140--Hb_004129_010 Hb_002835_280 Hb_002835_280 Hb_005305_120--Hb_002835_280 Hb_000861_100 Hb_000861_100 Hb_005305_120--Hb_000861_100 Hb_005305_120--Hb_001124_140 Hb_002759_100 Hb_002759_100 Hb_005305_120--Hb_002759_100 Hb_009449_100 Hb_009449_100 Hb_005305_120--Hb_009449_100 Hb_005305_120--Hb_005731_100 Hb_012812_010 Hb_012812_010 Hb_001230_030--Hb_012812_010 Hb_000340_290 Hb_000340_290 Hb_001230_030--Hb_000340_290 Hb_002400_160 Hb_002400_160 Hb_001230_030--Hb_002400_160 Hb_001488_040 Hb_001488_040 Hb_001230_030--Hb_001488_040 Hb_000331_510 Hb_000331_510 Hb_001230_030--Hb_000331_510 Hb_004837_150 Hb_004837_150 Hb_006816_480--Hb_004837_150 Hb_006816_480--Hb_000331_510 Hb_000110_300 Hb_000110_300 Hb_006816_480--Hb_000110_300 Hb_001956_060 Hb_001956_060 Hb_006816_480--Hb_001956_060 Hb_001123_150 Hb_001123_150 Hb_006816_480--Hb_001123_150 Hb_002046_060 Hb_002046_060 Hb_006816_480--Hb_002046_060 Hb_000416_060--Hb_005588_120 Hb_001699_170 Hb_001699_170 Hb_000416_060--Hb_001699_170 Hb_000800_010 Hb_000800_010 Hb_000416_060--Hb_000800_010 Hb_019654_110 Hb_019654_110 Hb_000416_060--Hb_019654_110 Hb_000416_060--Hb_132840_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.150011 0.983231 0.552196 0.631475 0.0567313 0.0553527
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.536468 0.10552 0.119512 0.622322 1.0207

CAGE analysis