Hb_000640_030

Information

Type -
Description -
Location Contig640: 10751-15294
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012075160.1
description PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000640_030 0.0 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
2 Hb_000827_060 0.2490008437 - - hypothetical protein POPTR_2151s00200g [Populus trichocarpa]
3 Hb_006569_050 0.2630581851 - - -
4 Hb_001916_070 0.2726171029 - - PREDICTED: phytochrome C [Jatropha curcas]
5 Hb_000404_040 0.276183536 - - conserved hypothetical protein [Ricinus communis]
6 Hb_026698_030 0.2795411525 - - hypothetical protein CISIN_1g030953mg [Citrus sinensis]
7 Hb_010998_020 0.2825082343 - - ubiquitin ligase E3 alpha, putative [Ricinus communis]
8 Hb_003349_100 0.2851197967 - - conserved hypothetical protein [Ricinus communis]
9 Hb_052689_010 0.286094896 - - heat shock cognate protein [Solanum commersonii]
10 Hb_002241_030 0.2863335436 - - Retrotransposon protein, putative [Theobroma cacao]
11 Hb_000589_380 0.2880090938 - - Phosphoribosylformylglycinamidine synthase, putative [Ricinus communis]
12 Hb_003835_100 0.2911708735 - - PREDICTED: putative U-box domain-containing protein 50 [Jatropha curcas]
13 Hb_001114_040 0.2965340806 - - PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
14 Hb_164019_010 0.298204976 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
15 Hb_008803_040 0.2994487566 - - PREDICTED: uncharacterized protein LOC105157106 [Sesamum indicum]
16 Hb_000811_060 0.2999191877 - - PREDICTED: uncharacterized protein LOC105650696 [Jatropha curcas]
17 Hb_000046_580 0.3001202879 - - PREDICTED: uncharacterized protein LOC105631800 [Jatropha curcas]
18 Hb_001159_190 0.304023697 - - amino acid binding protein, putative [Ricinus communis]
19 Hb_000001_130 0.3040562439 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
20 Hb_000015_050 0.3042641287 - - hypothetical protein JCGZ_01495 [Jatropha curcas]

Gene co-expression network

sample Hb_000640_030 Hb_000640_030 Hb_000827_060 Hb_000827_060 Hb_000640_030--Hb_000827_060 Hb_006569_050 Hb_006569_050 Hb_000640_030--Hb_006569_050 Hb_001916_070 Hb_001916_070 Hb_000640_030--Hb_001916_070 Hb_000404_040 Hb_000404_040 Hb_000640_030--Hb_000404_040 Hb_026698_030 Hb_026698_030 Hb_000640_030--Hb_026698_030 Hb_010998_020 Hb_010998_020 Hb_000640_030--Hb_010998_020 Hb_004020_020 Hb_004020_020 Hb_000827_060--Hb_004020_020 Hb_129910_010 Hb_129910_010 Hb_000827_060--Hb_129910_010 Hb_000352_340 Hb_000352_340 Hb_000827_060--Hb_000352_340 Hb_085868_010 Hb_085868_010 Hb_000827_060--Hb_085868_010 Hb_003467_030 Hb_003467_030 Hb_000827_060--Hb_003467_030 Hb_000883_060 Hb_000883_060 Hb_000827_060--Hb_000883_060 Hb_005523_010 Hb_005523_010 Hb_006569_050--Hb_005523_010 Hb_002374_250 Hb_002374_250 Hb_006569_050--Hb_002374_250 Hb_000705_250 Hb_000705_250 Hb_006569_050--Hb_000705_250 Hb_000529_140 Hb_000529_140 Hb_006569_050--Hb_000529_140 Hb_080761_010 Hb_080761_010 Hb_006569_050--Hb_080761_010 Hb_005754_030 Hb_005754_030 Hb_006569_050--Hb_005754_030 Hb_140627_020 Hb_140627_020 Hb_001916_070--Hb_140627_020 Hb_002316_160 Hb_002316_160 Hb_001916_070--Hb_002316_160 Hb_002235_200 Hb_002235_200 Hb_001916_070--Hb_002235_200 Hb_013358_010 Hb_013358_010 Hb_001916_070--Hb_013358_010 Hb_010180_060 Hb_010180_060 Hb_001916_070--Hb_010180_060 Hb_023344_160 Hb_023344_160 Hb_001916_070--Hb_023344_160 Hb_052946_010 Hb_052946_010 Hb_000404_040--Hb_052946_010 Hb_001408_120 Hb_001408_120 Hb_000404_040--Hb_001408_120 Hb_013399_090 Hb_013399_090 Hb_000404_040--Hb_013399_090 Hb_001341_010 Hb_001341_010 Hb_000404_040--Hb_001341_010 Hb_000025_500 Hb_000025_500 Hb_000404_040--Hb_000025_500 Hb_000731_290 Hb_000731_290 Hb_000404_040--Hb_000731_290 Hb_008803_040 Hb_008803_040 Hb_026698_030--Hb_008803_040 Hb_002943_010 Hb_002943_010 Hb_026698_030--Hb_002943_010 Hb_008226_030 Hb_008226_030 Hb_026698_030--Hb_008226_030 Hb_026698_030--Hb_000404_040 Hb_032718_010 Hb_032718_010 Hb_026698_030--Hb_032718_010 Hb_004574_040 Hb_004574_040 Hb_026698_030--Hb_004574_040 Hb_005488_170 Hb_005488_170 Hb_010998_020--Hb_005488_170 Hb_012053_090 Hb_012053_090 Hb_010998_020--Hb_012053_090 Hb_001726_050 Hb_001726_050 Hb_010998_020--Hb_001726_050 Hb_005701_130 Hb_005701_130 Hb_010998_020--Hb_005701_130 Hb_000714_040 Hb_000714_040 Hb_010998_020--Hb_000714_040 Hb_002631_250 Hb_002631_250 Hb_010998_020--Hb_002631_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0670354 0.0204969 0.010328 0.0253187 0.012995
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0297451 0 0.0880739 0.0466789 0.0980851

CAGE analysis