Hb_026698_030

Information

Type -
Description -
Location Contig26698: 23644-27264
Sequence    

Annotation

kegg
ID pop:POPTR_2151s00200g
description hypothetical protein
nr
ID KDO41020.1
description hypothetical protein CISIN_1g030953mg [Citrus sinensis]
swissprot
ID -
description -
trembl
ID A0A067DHJ3
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030953mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026698_030 0.0 - - hypothetical protein CISIN_1g030953mg [Citrus sinensis]
2 Hb_008803_040 0.1866868829 - - PREDICTED: uncharacterized protein LOC105157106 [Sesamum indicum]
3 Hb_002943_010 0.2038323212 - - PREDICTED: wall-associated receptor kinase-like 1 [Nelumbo nucifera]
4 Hb_008226_030 0.2040636327 - - RING-H2 finger protein ATL3C, putative [Ricinus communis]
5 Hb_000404_040 0.2054722253 - - conserved hypothetical protein [Ricinus communis]
6 Hb_032718_010 0.2073323014 desease resistance Gene Name: NB-ARC phosphoprotein phosphatase, putative [Ricinus communis]
7 Hb_004574_040 0.2092032899 - - PREDICTED: putative L-type lectin-domain containing receptor kinase II.2 [Jatropha curcas]
8 Hb_000369_080 0.2120380922 - - replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis]
9 Hb_000094_080 0.212828314 - - PREDICTED: uncharacterized protein LOC105633792 [Jatropha curcas]
10 Hb_000700_080 0.2209596447 - - conserved hypothetical protein [Ricinus communis]
11 Hb_007527_040 0.2244522426 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]
12 Hb_005489_070 0.2251746179 - - PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
13 Hb_004846_150 0.2256811811 - - hypothetical protein JCGZ_26968 [Jatropha curcas]
14 Hb_118157_020 0.2262038975 - - hypothetical protein MTR_3g456110 [Medicago truncatula]
15 Hb_000340_220 0.2264029479 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000062_640 0.2348745114 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF2.2-like isoform X2 [Populus euphratica]
17 Hb_029584_160 0.2353469265 - - PREDICTED: thioredoxin-like 2, chloroplastic [Populus euphratica]
18 Hb_004917_010 0.2355411863 - - PREDICTED: U-box domain-containing protein 13-like [Jatropha curcas]
19 Hb_000321_120 0.235739725 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
20 Hb_007897_030 0.2361314029 - - PREDICTED: serine/threonine-protein kinase-like protein CCR2 [Jatropha curcas]

Gene co-expression network

sample Hb_026698_030 Hb_026698_030 Hb_008803_040 Hb_008803_040 Hb_026698_030--Hb_008803_040 Hb_002943_010 Hb_002943_010 Hb_026698_030--Hb_002943_010 Hb_008226_030 Hb_008226_030 Hb_026698_030--Hb_008226_030 Hb_000404_040 Hb_000404_040 Hb_026698_030--Hb_000404_040 Hb_032718_010 Hb_032718_010 Hb_026698_030--Hb_032718_010 Hb_004574_040 Hb_004574_040 Hb_026698_030--Hb_004574_040 Hb_000705_250 Hb_000705_250 Hb_008803_040--Hb_000705_250 Hb_003186_040 Hb_003186_040 Hb_008803_040--Hb_003186_040 Hb_008803_040--Hb_000404_040 Hb_000022_140 Hb_000022_140 Hb_008803_040--Hb_000022_140 Hb_173808_010 Hb_173808_010 Hb_008803_040--Hb_173808_010 Hb_000340_220 Hb_000340_220 Hb_002943_010--Hb_000340_220 Hb_000066_040 Hb_000066_040 Hb_002943_010--Hb_000066_040 Hb_002603_010 Hb_002603_010 Hb_002943_010--Hb_002603_010 Hb_013399_090 Hb_013399_090 Hb_002943_010--Hb_013399_090 Hb_002943_010--Hb_000404_040 Hb_002928_020 Hb_002928_020 Hb_002943_010--Hb_002928_020 Hb_001393_010 Hb_001393_010 Hb_008226_030--Hb_001393_010 Hb_003408_060 Hb_003408_060 Hb_008226_030--Hb_003408_060 Hb_005489_070 Hb_005489_070 Hb_008226_030--Hb_005489_070 Hb_007735_060 Hb_007735_060 Hb_008226_030--Hb_007735_060 Hb_001178_030 Hb_001178_030 Hb_008226_030--Hb_001178_030 Hb_000367_020 Hb_000367_020 Hb_008226_030--Hb_000367_020 Hb_052946_010 Hb_052946_010 Hb_000404_040--Hb_052946_010 Hb_001408_120 Hb_001408_120 Hb_000404_040--Hb_001408_120 Hb_000404_040--Hb_013399_090 Hb_001341_010 Hb_001341_010 Hb_000404_040--Hb_001341_010 Hb_000025_500 Hb_000025_500 Hb_000404_040--Hb_000025_500 Hb_000731_290 Hb_000731_290 Hb_000404_040--Hb_000731_290 Hb_027010_030 Hb_027010_030 Hb_032718_010--Hb_027010_030 Hb_007237_010 Hb_007237_010 Hb_032718_010--Hb_007237_010 Hb_004846_150 Hb_004846_150 Hb_032718_010--Hb_004846_150 Hb_034507_010 Hb_034507_010 Hb_032718_010--Hb_034507_010 Hb_000890_180 Hb_000890_180 Hb_032718_010--Hb_000890_180 Hb_026698_020 Hb_026698_020 Hb_004574_040--Hb_026698_020 Hb_001514_240 Hb_001514_240 Hb_004574_040--Hb_001514_240 Hb_004574_040--Hb_000340_220 Hb_000417_410 Hb_000417_410 Hb_004574_040--Hb_000417_410 Hb_003581_130 Hb_003581_130 Hb_004574_040--Hb_003581_130 Hb_002343_010 Hb_002343_010 Hb_004574_040--Hb_002343_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0944316 1.05672 0.456119 0.602162 0.027201 0.207473
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0667118 0 0.854664 0.509419 1.37007

CAGE analysis