Hb_000465_030

Information

Type -
Description -
Location Contig465: 16481-19262
Sequence    

Annotation

kegg
ID tcc:TCM_015943
description Formyltetrahydrofolate deformylase isoform 1
nr
ID XP_012070010.1
description PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
swissprot
ID F4JP46
description Formyltetrahydrofolate deformylase 2, mitochondrial OS=Arabidopsis thaliana GN=PURU2 PE=1 SV=1
trembl
ID A0A067KUK0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03417 PE=4 SV=1
Gene Ontology
ID GO:0003824
description formyltetrahydrofolate deformylase mitochondrial isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000465_030 0.0 - - PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
2 Hb_009846_010 0.0995450623 - - PREDICTED: uncharacterized protein LOC105643801 [Jatropha curcas]
3 Hb_000210_210 0.1009776646 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
4 Hb_000243_360 0.1025212559 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 isoform X1 [Vitis vinifera]
5 Hb_000847_040 0.1029520803 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 9 [Jatropha curcas]
6 Hb_001033_080 0.1061692839 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
7 Hb_002006_080 0.1062126565 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Citrus sinensis]
8 Hb_000979_210 0.1063536938 - - conserved hypothetical protein [Ricinus communis]
9 Hb_025048_050 0.1108089779 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]
10 Hb_002028_070 0.1114768014 - - PREDICTED: circadian locomoter output cycles protein kaput [Jatropha curcas]
11 Hb_011316_080 0.1121032779 - - Cucumisin precursor, putative [Ricinus communis]
12 Hb_005357_210 0.1124366831 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein MERISTEM L1 [Jatropha curcas]
13 Hb_002259_020 0.113328901 - - PREDICTED: uncharacterized protein LOC105646333 [Jatropha curcas]
14 Hb_001284_050 0.1135159026 - - PREDICTED: uncharacterized protein LOC100781779 isoform X1 [Glycine max]
15 Hb_001946_070 0.1143865363 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
16 Hb_001638_060 0.1148040291 - - PREDICTED: rho GTPase-activating protein 3-like isoform X1 [Populus euphratica]
17 Hb_009293_030 0.1156813289 - - PREDICTED: salicylate carboxymethyltransferase [Jatropha curcas]
18 Hb_089140_130 0.1158625138 - - hypothetical protein POPTR_0006s14510g [Populus trichocarpa]
19 Hb_000334_020 0.1165350451 - - PREDICTED: dynein light chain 2, cytoplasmic [Jatropha curcas]
20 Hb_011512_100 0.1168105751 - - PREDICTED: uncharacterized protein LOC105650382 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000465_030 Hb_000465_030 Hb_009846_010 Hb_009846_010 Hb_000465_030--Hb_009846_010 Hb_000210_210 Hb_000210_210 Hb_000465_030--Hb_000210_210 Hb_000243_360 Hb_000243_360 Hb_000465_030--Hb_000243_360 Hb_000847_040 Hb_000847_040 Hb_000465_030--Hb_000847_040 Hb_001033_080 Hb_001033_080 Hb_000465_030--Hb_001033_080 Hb_002006_080 Hb_002006_080 Hb_000465_030--Hb_002006_080 Hb_000362_080 Hb_000362_080 Hb_009846_010--Hb_000362_080 Hb_009293_030 Hb_009293_030 Hb_009846_010--Hb_009293_030 Hb_009771_010 Hb_009771_010 Hb_009846_010--Hb_009771_010 Hb_089140_130 Hb_089140_130 Hb_009846_010--Hb_089140_130 Hb_002929_030 Hb_002929_030 Hb_009846_010--Hb_002929_030 Hb_001153_170 Hb_001153_170 Hb_009846_010--Hb_001153_170 Hb_000979_210 Hb_000979_210 Hb_000210_210--Hb_000979_210 Hb_001638_060 Hb_001638_060 Hb_000210_210--Hb_001638_060 Hb_004235_070 Hb_004235_070 Hb_000210_210--Hb_004235_070 Hb_006261_020 Hb_006261_020 Hb_000210_210--Hb_006261_020 Hb_000210_210--Hb_002006_080 Hb_000836_620 Hb_000836_620 Hb_000210_210--Hb_000836_620 Hb_002028_070 Hb_002028_070 Hb_000243_360--Hb_002028_070 Hb_000243_360--Hb_089140_130 Hb_000243_360--Hb_001153_170 Hb_001946_070 Hb_001946_070 Hb_000243_360--Hb_001946_070 Hb_006594_030 Hb_006594_030 Hb_000243_360--Hb_006594_030 Hb_000136_120 Hb_000136_120 Hb_000243_360--Hb_000136_120 Hb_011316_080 Hb_011316_080 Hb_000847_040--Hb_011316_080 Hb_000847_040--Hb_002006_080 Hb_000847_040--Hb_089140_130 Hb_000847_040--Hb_000979_210 Hb_000847_040--Hb_001153_170 Hb_000847_040--Hb_009771_010 Hb_000334_020 Hb_000334_020 Hb_001033_080--Hb_000334_020 Hb_000016_140 Hb_000016_140 Hb_001033_080--Hb_000016_140 Hb_001033_080--Hb_002028_070 Hb_009189_090 Hb_009189_090 Hb_001033_080--Hb_009189_090 Hb_005357_210 Hb_005357_210 Hb_001033_080--Hb_005357_210 Hb_001033_080--Hb_002006_080 Hb_002006_080--Hb_011316_080 Hb_002006_080--Hb_000979_210 Hb_000740_010 Hb_000740_010 Hb_002006_080--Hb_000740_010 Hb_002006_080--Hb_004235_070 Hb_071557_010 Hb_071557_010 Hb_002006_080--Hb_071557_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 2.14761 0.225082 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0473386 0 0.019107 0.958055

CAGE analysis