Hb_000363_410

Information

Type -
Description -
Location Contig363: 359123-365277
Sequence    

Annotation

kegg
ID rcu:RCOM_0546860
description Protein regulator of cytokinesis, putative
nr
ID KDP39198.1
description hypothetical protein JCGZ_00955 [Jatropha curcas]
swissprot
ID Q9FLP0
description 65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana GN=MAP65-1 PE=1 SV=1
trembl
ID A0A067KW72
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00955 PE=4 SV=1
Gene Ontology
ID GO:0008017
description 65-kda microtubule-associated protein 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37341: 359128-363657 , PASA_asmbl_37342: 359128-364659 , PASA_asmbl_37343: 361075-364650
cDNA
(Sanger)
(ID:Location)		 043_I18.ab1: 362221-364650

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000363_410 0.0 - - hypothetical protein JCGZ_00955 [Jatropha curcas]
2 Hb_052135_020 0.1148157186 - - PREDICTED: MAP kinase kinase MKK1/SSP32-like [Jatropha curcas]
3 Hb_002687_060 0.1231784379 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
4 Hb_004297_090 0.1251206527 - - PREDICTED: DNA polymerase epsilon catalytic subunit A [Jatropha curcas]
5 Hb_005504_030 0.1275329194 - - PREDICTED: somatic embryogenesis receptor kinase 2-like [Pyrus x bretschneideri]
6 Hb_000009_140 0.1290313402 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
7 Hb_000803_120 0.1319758085 - - PREDICTED: zinc finger CCCH domain-containing protein 22-like isoform X1 [Jatropha curcas]
8 Hb_005694_180 0.1354271653 - - PREDICTED: cytochrome b5 [Jatropha curcas]
9 Hb_000258_090 0.1374032919 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
10 Hb_005833_030 0.1414086944 - - PREDICTED: uncharacterized membrane protein At1g16860 [Jatropha curcas]
11 Hb_000120_310 0.1414532831 - - Gibberellin 3-beta-dioxygenase, putative [Ricinus communis]
12 Hb_003227_010 0.1441697399 - - PREDICTED: dynamin-related protein 1E-like [Jatropha curcas]
13 Hb_024758_020 0.1455943494 - - acyl-CoA binding protein 3B [Vernicia fordii]
14 Hb_001195_420 0.1458590347 - - PREDICTED: uncharacterized protein LOC105633774 isoform X4 [Jatropha curcas]
15 Hb_003683_130 0.1466039537 - - PREDICTED: enolase 1, chloroplastic [Jatropha curcas]
16 Hb_000567_090 0.1492126875 - - PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Jatropha curcas]
17 Hb_001021_070 0.1498319028 - - unnamed protein product [Vitis vinifera]
18 Hb_004586_240 0.1510413431 - - PREDICTED: serine/threonine-protein kinase-like protein At1g28390 [Jatropha curcas]
19 Hb_002235_190 0.1512645862 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000260_400 0.1524348777 - - PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]

Gene co-expression network

sample Hb_000363_410 Hb_000363_410 Hb_052135_020 Hb_052135_020 Hb_000363_410--Hb_052135_020 Hb_002687_060 Hb_002687_060 Hb_000363_410--Hb_002687_060 Hb_004297_090 Hb_004297_090 Hb_000363_410--Hb_004297_090 Hb_005504_030 Hb_005504_030 Hb_000363_410--Hb_005504_030 Hb_000009_140 Hb_000009_140 Hb_000363_410--Hb_000009_140 Hb_000803_120 Hb_000803_120 Hb_000363_410--Hb_000803_120 Hb_002317_010 Hb_002317_010 Hb_052135_020--Hb_002317_010 Hb_129204_020 Hb_129204_020 Hb_052135_020--Hb_129204_020 Hb_000567_090 Hb_000567_090 Hb_052135_020--Hb_000567_090 Hb_010068_070 Hb_010068_070 Hb_052135_020--Hb_010068_070 Hb_024758_020 Hb_024758_020 Hb_052135_020--Hb_024758_020 Hb_005833_030 Hb_005833_030 Hb_052135_020--Hb_005833_030 Hb_002687_060--Hb_005833_030 Hb_000297_030 Hb_000297_030 Hb_002687_060--Hb_000297_030 Hb_002687_060--Hb_024758_020 Hb_006468_010 Hb_006468_010 Hb_002687_060--Hb_006468_010 Hb_158845_060 Hb_158845_060 Hb_002687_060--Hb_158845_060 Hb_000122_080 Hb_000122_080 Hb_002687_060--Hb_000122_080 Hb_001677_100 Hb_001677_100 Hb_004297_090--Hb_001677_100 Hb_000365_200 Hb_000365_200 Hb_004297_090--Hb_000365_200 Hb_003683_130 Hb_003683_130 Hb_004297_090--Hb_003683_130 Hb_000260_400 Hb_000260_400 Hb_004297_090--Hb_000260_400 Hb_004883_020 Hb_004883_020 Hb_004297_090--Hb_004883_020 Hb_009296_020 Hb_009296_020 Hb_004297_090--Hb_009296_020 Hb_005504_030--Hb_000009_140 Hb_004586_240 Hb_004586_240 Hb_005504_030--Hb_004586_240 Hb_033363_010 Hb_033363_010 Hb_005504_030--Hb_033363_010 Hb_000258_090 Hb_000258_090 Hb_005504_030--Hb_000258_090 Hb_000072_020 Hb_000072_020 Hb_005504_030--Hb_000072_020 Hb_005504_030--Hb_010068_070 Hb_000009_140--Hb_004586_240 Hb_000009_140--Hb_033363_010 Hb_000009_140--Hb_000072_020 Hb_009646_010 Hb_009646_010 Hb_000009_140--Hb_009646_010 Hb_000009_140--Hb_010068_070 Hb_007575_030 Hb_007575_030 Hb_000803_120--Hb_007575_030 Hb_000309_030 Hb_000309_030 Hb_000803_120--Hb_000309_030 Hb_005694_180 Hb_005694_180 Hb_000803_120--Hb_005694_180 Hb_000661_220 Hb_000661_220 Hb_000803_120--Hb_000661_220 Hb_000803_120--Hb_004297_090 Hb_000803_120--Hb_000567_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.03753 23.4239 38.7492 31.3437 7.42979 5.89032
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.29815 1.40816 6.55481 40.0117 10.5299

CAGE analysis