Hb_000363_250

Information

Type -
Description -
Location Contig363: 193174-195565
Sequence    

Annotation

kegg
ID mdm:103430074
description pirin-like protein
nr
ID XP_008366427.1
description PREDICTED: pirin-like protein [Malus domestica]
swissprot
ID Q9LPS9
description Pirin-like protein At1g50590 OS=Arabidopsis thaliana GN=At1g50590 PE=2 SV=1
trembl
ID W9RCB7
description Uncharacterized protein OS=Morus notabilis GN=L484_009535 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000363_250 0.0 - - PREDICTED: pirin-like protein [Malus domestica]
2 Hb_000659_040 0.0997429782 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
3 Hb_000215_290 0.1109719717 transcription factor TF Family: NAC PREDICTED: protein BEARSKIN2 isoform X2 [Jatropha curcas]
4 Hb_144703_010 0.1147113843 - - Phospholipase A 2A, IIA,PLA2A [Theobroma cacao]
5 Hb_005271_180 0.117922385 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
6 Hb_001951_230 0.1184660191 - - PREDICTED: phytochrome E isoform X2 [Jatropha curcas]
7 Hb_000613_250 0.120623493 - - PREDICTED: nudix hydrolase 2-like [Jatropha curcas]
8 Hb_003835_030 0.1218322256 - - glycosyltransferase, partial [Arabidopsis thaliana]
9 Hb_000472_020 0.1229780579 - - PREDICTED: uncharacterized protein LOC105641103 [Jatropha curcas]
10 Hb_143871_010 0.124705959 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
11 Hb_001269_240 0.1250587221 - - aquaporin NIP6.1 family protein [Populus trichocarpa]
12 Hb_001013_050 0.127395162 - - unnamed protein product [Coffea canephora]
13 Hb_000270_750 0.1292095953 - - PREDICTED: RING-H2 finger protein ATL46-like [Populus euphratica]
14 Hb_031862_120 0.133119577 - - PREDICTED: root phototropism protein 3 [Jatropha curcas]
15 Hb_005074_010 0.1331427653 - - PREDICTED: uncharacterized protein LOC105644456 [Jatropha curcas]
16 Hb_000069_540 0.1332071822 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
17 Hb_002838_010 0.1332194674 - - AGPase large subunit protein [Hevea brasiliensis]
18 Hb_007441_360 0.1365851639 - - PREDICTED: uncharacterized protein LOC105643270 [Jatropha curcas]
19 Hb_000326_080 0.1368907402 - - lrr receptor protein kinase, putative [Ricinus communis]
20 Hb_000342_020 0.1369954445 - - bel1 homeotic protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000363_250 Hb_000363_250 Hb_000659_040 Hb_000659_040 Hb_000363_250--Hb_000659_040 Hb_000215_290 Hb_000215_290 Hb_000363_250--Hb_000215_290 Hb_144703_010 Hb_144703_010 Hb_000363_250--Hb_144703_010 Hb_005271_180 Hb_005271_180 Hb_000363_250--Hb_005271_180 Hb_001951_230 Hb_001951_230 Hb_000363_250--Hb_001951_230 Hb_000613_250 Hb_000613_250 Hb_000363_250--Hb_000613_250 Hb_003147_040 Hb_003147_040 Hb_000659_040--Hb_003147_040 Hb_000272_030 Hb_000272_030 Hb_000659_040--Hb_000272_030 Hb_001318_100 Hb_001318_100 Hb_000659_040--Hb_001318_100 Hb_000856_200 Hb_000856_200 Hb_000659_040--Hb_000856_200 Hb_007894_070 Hb_007894_070 Hb_000659_040--Hb_007894_070 Hb_001706_020 Hb_001706_020 Hb_000215_290--Hb_001706_020 Hb_000215_290--Hb_144703_010 Hb_000025_590 Hb_000025_590 Hb_000215_290--Hb_000025_590 Hb_143629_200 Hb_143629_200 Hb_000215_290--Hb_143629_200 Hb_001174_030 Hb_001174_030 Hb_000215_290--Hb_001174_030 Hb_005488_030 Hb_005488_030 Hb_000215_290--Hb_005488_030 Hb_000069_540 Hb_000069_540 Hb_144703_010--Hb_000069_540 Hb_019496_040 Hb_019496_040 Hb_144703_010--Hb_019496_040 Hb_008598_010 Hb_008598_010 Hb_144703_010--Hb_008598_010 Hb_000472_020 Hb_000472_020 Hb_144703_010--Hb_000472_020 Hb_002902_040 Hb_002902_040 Hb_144703_010--Hb_002902_040 Hb_000342_020 Hb_000342_020 Hb_144703_010--Hb_000342_020 Hb_007007_090 Hb_007007_090 Hb_005271_180--Hb_007007_090 Hb_004143_140 Hb_004143_140 Hb_005271_180--Hb_004143_140 Hb_005074_010 Hb_005074_010 Hb_005271_180--Hb_005074_010 Hb_001046_040 Hb_001046_040 Hb_005271_180--Hb_001046_040 Hb_044624_010 Hb_044624_010 Hb_005271_180--Hb_044624_010 Hb_001951_230--Hb_000215_290 Hb_000326_080 Hb_000326_080 Hb_001951_230--Hb_000326_080 Hb_004907_070 Hb_004907_070 Hb_001951_230--Hb_004907_070 Hb_001951_230--Hb_005271_180 Hb_001357_060 Hb_001357_060 Hb_001951_230--Hb_001357_060 Hb_000613_250--Hb_000342_020 Hb_000613_250--Hb_000472_020 Hb_004421_010 Hb_004421_010 Hb_000613_250--Hb_004421_010 Hb_000477_110 Hb_000477_110 Hb_000613_250--Hb_000477_110 Hb_001013_050 Hb_001013_050 Hb_000613_250--Hb_001013_050 Hb_000613_250--Hb_144703_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0226263 8.83591 4.6429 10.0392 0.227004 0.079744
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.103677 0.20385 0.374758 2.73926 8.4961

CAGE analysis