Hb_000320_460

Information

Type -
Description -
Location Contig320: 353137-357478
Sequence    

Annotation

kegg
ID rcu:RCOM_0904720
description hypothetical protein
nr
ID XP_012092373.1
description PREDICTED: uncharacterized protein LOC105650098 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JL83
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21221 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000320_460 0.0 - - PREDICTED: uncharacterized protein LOC105650098 [Jatropha curcas]
2 Hb_011202_030 0.1168778788 - - arsenite-resistance protein, putative [Ricinus communis]
3 Hb_003895_020 0.1321901059 - - PREDICTED: dedicator of cytokinesis protein 7 isoform X2 [Jatropha curcas]
4 Hb_003120_070 0.1335961621 - - ATP binding protein, putative [Ricinus communis]
5 Hb_000732_070 0.1367482832 - - PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
6 Hb_000751_140 0.1460295708 - - PREDICTED: clathrin interactor EPSIN 2 [Jatropha curcas]
7 Hb_155159_010 0.1474304953 - - PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1 [Jatropha curcas]
8 Hb_007283_030 0.1489601217 - - PREDICTED: pre-mRNA-processing protein 40C-like [Malus domestica]
9 Hb_001904_030 0.1491807598 - - PREDICTED: importin-5 [Jatropha curcas]
10 Hb_000086_050 0.1501312931 - - PREDICTED: structural maintenance of chromosomes protein 1 [Jatropha curcas]
11 Hb_000117_070 0.1504399914 - - PREDICTED: branchpoint-bridging protein [Jatropha curcas]
12 Hb_000922_220 0.1505549688 - - PREDICTED: serine/threonine-protein kinase ATM-like [Jatropha curcas]
13 Hb_000334_130 0.1508798754 - - hypothetical protein JCGZ_16781 [Jatropha curcas]
14 Hb_000260_760 0.1518767287 - - PREDICTED: protein EXPORTIN 1A [Jatropha curcas]
15 Hb_014720_020 0.1530739568 - - PREDICTED: serine/threonine-protein kinase ATM [Jatropha curcas]
16 Hb_020805_100 0.1551142843 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1b [Jatropha curcas]
17 Hb_159295_010 0.1557220955 - - hypothetical protein RCOM_1520720 [Ricinus communis]
18 Hb_044653_020 0.1559246473 transcription factor, desease resistance TF Family: GNAT, Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
19 Hb_000470_110 0.1568781067 - - PREDICTED: probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001 [Jatropha curcas]
20 Hb_002687_090 0.1572345976 - - PREDICTED: PAX3- and PAX7-binding protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000320_460 Hb_000320_460 Hb_011202_030 Hb_011202_030 Hb_000320_460--Hb_011202_030 Hb_003895_020 Hb_003895_020 Hb_000320_460--Hb_003895_020 Hb_003120_070 Hb_003120_070 Hb_000320_460--Hb_003120_070 Hb_000732_070 Hb_000732_070 Hb_000320_460--Hb_000732_070 Hb_000751_140 Hb_000751_140 Hb_000320_460--Hb_000751_140 Hb_155159_010 Hb_155159_010 Hb_000320_460--Hb_155159_010 Hb_001221_090 Hb_001221_090 Hb_011202_030--Hb_001221_090 Hb_007283_030 Hb_007283_030 Hb_011202_030--Hb_007283_030 Hb_001904_030 Hb_001904_030 Hb_011202_030--Hb_001904_030 Hb_044486_040 Hb_044486_040 Hb_011202_030--Hb_044486_040 Hb_011202_030--Hb_155159_010 Hb_009476_090 Hb_009476_090 Hb_011202_030--Hb_009476_090 Hb_000866_080 Hb_000866_080 Hb_003895_020--Hb_000866_080 Hb_004324_060 Hb_004324_060 Hb_003895_020--Hb_004324_060 Hb_003895_020--Hb_001221_090 Hb_030545_030 Hb_030545_030 Hb_003895_020--Hb_030545_030 Hb_002903_140 Hb_002903_140 Hb_003895_020--Hb_002903_140 Hb_003895_020--Hb_155159_010 Hb_014720_020 Hb_014720_020 Hb_003120_070--Hb_014720_020 Hb_002005_120 Hb_002005_120 Hb_003120_070--Hb_002005_120 Hb_003120_070--Hb_000751_140 Hb_000526_060 Hb_000526_060 Hb_003120_070--Hb_000526_060 Hb_000117_070 Hb_000117_070 Hb_003120_070--Hb_000117_070 Hb_000197_290 Hb_000197_290 Hb_003120_070--Hb_000197_290 Hb_020805_100 Hb_020805_100 Hb_000732_070--Hb_020805_100 Hb_000086_050 Hb_000086_050 Hb_000732_070--Hb_000086_050 Hb_000732_070--Hb_003895_020 Hb_002400_230 Hb_002400_230 Hb_000732_070--Hb_002400_230 Hb_000334_130 Hb_000334_130 Hb_000732_070--Hb_000334_130 Hb_006573_160 Hb_006573_160 Hb_000732_070--Hb_006573_160 Hb_044653_020 Hb_044653_020 Hb_000751_140--Hb_044653_020 Hb_000751_140--Hb_003895_020 Hb_000751_140--Hb_000334_130 Hb_000751_140--Hb_000117_070 Hb_000635_200 Hb_000635_200 Hb_000751_140--Hb_000635_200 Hb_002282_060 Hb_002282_060 Hb_155159_010--Hb_002282_060 Hb_011920_020 Hb_011920_020 Hb_155159_010--Hb_011920_020 Hb_155159_010--Hb_007283_030 Hb_000703_130 Hb_000703_130 Hb_155159_010--Hb_000703_130 Hb_001231_090 Hb_001231_090 Hb_155159_010--Hb_001231_090 Hb_010661_020 Hb_010661_020 Hb_155159_010--Hb_010661_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0731766 0.49782 0.293758 0.187974 0.21879 0.321031
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0208884 0.0657441 0.0624487 0.169905 0.313237

CAGE analysis