Hb_000106_110

Information

Type -
Description -
Location Contig106: 149266-150372
Sequence    

Annotation

kegg
ID rcu:RCOM_0011200
description Cationic peroxidase 1 precursor, putative (EC:1.11.1.7)
nr
ID XP_012073102.1
description PREDICTED: peroxidase 5-like [Jatropha curcas]
swissprot
ID A7QEU4
description Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=2
trembl
ID A0A067KL95
description Peroxidase OS=Jatropha curcas GN=JCGZ_06082 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000106_110 0.0 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
2 Hb_000500_350 0.2644498397 - - PREDICTED: uncharacterized protein LOC105649734 [Jatropha curcas]
3 Hb_007336_050 0.2672723378 - - PREDICTED: uncharacterized protein LOC105630915 [Jatropha curcas]
4 Hb_001016_010 0.2749360611 - - conserved hypothetical protein [Ricinus communis]
5 Hb_005504_040 0.2753352107 - - conserved hypothetical protein [Ricinus communis]
6 Hb_114310_120 0.2816711533 - - PREDICTED: 50S ribosomal protein L31, chloroplastic [Eucalyptus grandis]
7 Hb_000359_200 0.2840418054 - - triacylglycerol lipase, putative [Ricinus communis]
8 Hb_001890_020 0.2848379213 - - hypothetical protein CICLE_v10025198mg [Citrus clementina]
9 Hb_004221_030 0.2906293499 transcription factor TF Family: bHLH PREDICTED: transcription factor SPATULA-like isoform X1 [Jatropha curcas]
10 Hb_001195_050 0.2947046612 - - PREDICTED: adenosine kinase [Jatropha curcas]
11 Hb_000526_010 0.3031393544 - - PREDICTED: uroporphyrinogen-III C-methyltransferase [Jatropha curcas]
12 Hb_000345_130 0.3037602476 - - unnamed protein product [Coffea canephora]
13 Hb_004125_050 0.3048774121 - - PREDICTED: kinesin-related protein 13 [Jatropha curcas]
14 Hb_000567_400 0.3073704618 - - cytochrome P450 family protein [Populus trichocarpa]
15 Hb_003784_040 0.3089500899 - - Afadin- and alpha-actinin-binding protein, putative [Ricinus communis]
16 Hb_000438_130 0.310826581 - - uroporphyrinogen decarboxylase, putative [Ricinus communis]
17 Hb_081529_010 0.312765425 - - unnamed protein product [Vitis vinifera]
18 Hb_000367_250 0.3135684949 - - unnamed protein product [Vitis vinifera]
19 Hb_029510_130 0.3141728783 - - PREDICTED: malonate--CoA ligase [Jatropha curcas]
20 Hb_002662_040 0.3146437584 - - PREDICTED: uncharacterized protein LOC105630915 [Jatropha curcas]

Gene co-expression network

sample Hb_000106_110 Hb_000106_110 Hb_000500_350 Hb_000500_350 Hb_000106_110--Hb_000500_350 Hb_007336_050 Hb_007336_050 Hb_000106_110--Hb_007336_050 Hb_001016_010 Hb_001016_010 Hb_000106_110--Hb_001016_010 Hb_005504_040 Hb_005504_040 Hb_000106_110--Hb_005504_040 Hb_114310_120 Hb_114310_120 Hb_000106_110--Hb_114310_120 Hb_000359_200 Hb_000359_200 Hb_000106_110--Hb_000359_200 Hb_084230_010 Hb_084230_010 Hb_000500_350--Hb_084230_010 Hb_005914_050 Hb_005914_050 Hb_000500_350--Hb_005914_050 Hb_000438_130 Hb_000438_130 Hb_000500_350--Hb_000438_130 Hb_001386_090 Hb_001386_090 Hb_000500_350--Hb_001386_090 Hb_004221_030 Hb_004221_030 Hb_000500_350--Hb_004221_030 Hb_012545_040 Hb_012545_040 Hb_000500_350--Hb_012545_040 Hb_000816_210 Hb_000816_210 Hb_007336_050--Hb_000816_210 Hb_007336_050--Hb_000438_130 Hb_002603_090 Hb_002603_090 Hb_007336_050--Hb_002603_090 Hb_011457_120 Hb_011457_120 Hb_007336_050--Hb_011457_120 Hb_003638_040 Hb_003638_040 Hb_007336_050--Hb_003638_040 Hb_029510_130 Hb_029510_130 Hb_007336_050--Hb_029510_130 Hb_004162_230 Hb_004162_230 Hb_001016_010--Hb_004162_230 Hb_000544_030 Hb_000544_030 Hb_001016_010--Hb_000544_030 Hb_002411_060 Hb_002411_060 Hb_001016_010--Hb_002411_060 Hb_025214_120 Hb_025214_120 Hb_001016_010--Hb_025214_120 Hb_010998_050 Hb_010998_050 Hb_001016_010--Hb_010998_050 Hb_030627_070 Hb_030627_070 Hb_001016_010--Hb_030627_070 Hb_003784_040 Hb_003784_040 Hb_005504_040--Hb_003784_040 Hb_000139_280 Hb_000139_280 Hb_005504_040--Hb_000139_280 Hb_010180_030 Hb_010180_030 Hb_005504_040--Hb_010180_030 Hb_001780_080 Hb_001780_080 Hb_005504_040--Hb_001780_080 Hb_006275_060 Hb_006275_060 Hb_005504_040--Hb_006275_060 Hb_005725_150 Hb_005725_150 Hb_005504_040--Hb_005725_150 Hb_000345_130 Hb_000345_130 Hb_114310_120--Hb_000345_130 Hb_114310_120--Hb_010998_050 Hb_114310_120--Hb_084230_010 Hb_114310_120--Hb_004221_030 Hb_005162_130 Hb_005162_130 Hb_114310_120--Hb_005162_130 Hb_036790_030 Hb_036790_030 Hb_114310_120--Hb_036790_030 Hb_004195_140 Hb_004195_140 Hb_000359_200--Hb_004195_140 Hb_000331_570 Hb_000331_570 Hb_000359_200--Hb_000331_570 Hb_000088_240 Hb_000088_240 Hb_000359_200--Hb_000088_240 Hb_000331_420 Hb_000331_420 Hb_000359_200--Hb_000331_420 Hb_001232_090 Hb_001232_090 Hb_000359_200--Hb_001232_090 Hb_038044_010 Hb_038044_010 Hb_000359_200--Hb_038044_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.482298 0.167148 0.022061 0.135765
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.100725 0 0.0729318 0.0318543 0.0810616

CAGE analysis