Hb_000071_120

Information

Type -
Description -
Location Contig71: 144411-145721
Sequence    

Annotation

kegg
ID cit:102615849
description fasciclin-like arabinogalactan protein 4-like
nr
ID XP_012065029.1
description PREDICTED: fasciclin-like arabinogalactan protein 4 [Jatropha curcas]
swissprot
ID Q9SNC3
description Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana GN=FLA4 PE=1 SV=1
trembl
ID A0A067L773
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05699 PE=4 SV=1
Gene Ontology
ID GO:0009897
description fasciclin-like arabinogalactan protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000071_120 0.0 - - PREDICTED: fasciclin-like arabinogalactan protein 4 [Jatropha curcas]
2 Hb_002495_080 0.0903998771 - - PREDICTED: polygalacturonase ADPG2 [Jatropha curcas]
3 Hb_001016_050 0.0941528296 - - drought-inducible protein [Manihot esculenta]
4 Hb_001789_030 0.1032393733 - - PREDICTED: signal peptide peptidase-like 1 [Jatropha curcas]
5 Hb_000048_060 0.1044615153 - - PREDICTED: probable apyrase 7 isoform X1 [Jatropha curcas]
6 Hb_001500_110 0.1079526199 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_005276_060 0.1087434285 - - PREDICTED: cyclin-P3-1 isoform X2 [Jatropha curcas]
8 Hb_001882_050 0.1096701582 - - hydroxysteroid dehydrogenase, putative [Ricinus communis]
9 Hb_002828_020 0.1118406804 - - protein binding protein, putative [Ricinus communis]
10 Hb_000683_070 0.1147259837 - - d-3-phosphoglycerate dehydrogenase, putative [Ricinus communis]
11 Hb_006658_020 0.1172409389 - - PREDICTED: uncharacterized protein LOC105633529 [Jatropha curcas]
12 Hb_000009_400 0.1185035698 - - PREDICTED: BTB/POZ domain-containing protein At3g50780 [Jatropha curcas]
13 Hb_012322_020 0.118653601 - - -
14 Hb_002728_080 0.1189378001 - - WD-repeat protein, putative [Ricinus communis]
15 Hb_000637_150 0.1200028577 - - Protein CASP, putative [Ricinus communis]
16 Hb_000313_220 0.1216756812 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
17 Hb_000256_150 0.1228898889 - - PREDICTED: trafficking protein particle complex II-specific subunit 120 homolog [Jatropha curcas]
18 Hb_000008_270 0.1230907999 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein REVOLUTA [Jatropha curcas]
19 Hb_004109_230 0.1242479566 - - heat shock protein binding protein, putative [Ricinus communis]
20 Hb_005797_010 0.1249356271 - - PREDICTED: lysophospholipid acyltransferase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000071_120 Hb_000071_120 Hb_002495_080 Hb_002495_080 Hb_000071_120--Hb_002495_080 Hb_001016_050 Hb_001016_050 Hb_000071_120--Hb_001016_050 Hb_001789_030 Hb_001789_030 Hb_000071_120--Hb_001789_030 Hb_000048_060 Hb_000048_060 Hb_000071_120--Hb_000048_060 Hb_001500_110 Hb_001500_110 Hb_000071_120--Hb_001500_110 Hb_005276_060 Hb_005276_060 Hb_000071_120--Hb_005276_060 Hb_005650_010 Hb_005650_010 Hb_002495_080--Hb_005650_010 Hb_006658_020 Hb_006658_020 Hb_002495_080--Hb_006658_020 Hb_000340_230 Hb_000340_230 Hb_002495_080--Hb_000340_230 Hb_000441_090 Hb_000441_090 Hb_002495_080--Hb_000441_090 Hb_000258_070 Hb_000258_070 Hb_002495_080--Hb_000258_070 Hb_000049_020 Hb_000049_020 Hb_002495_080--Hb_000049_020 Hb_001016_050--Hb_006658_020 Hb_001016_050--Hb_005276_060 Hb_000009_400 Hb_000009_400 Hb_001016_050--Hb_000009_400 Hb_004109_230 Hb_004109_230 Hb_001016_050--Hb_004109_230 Hb_008253_020 Hb_008253_020 Hb_001016_050--Hb_008253_020 Hb_007810_110 Hb_007810_110 Hb_001016_050--Hb_007810_110 Hb_000163_090 Hb_000163_090 Hb_001789_030--Hb_000163_090 Hb_000352_300 Hb_000352_300 Hb_001789_030--Hb_000352_300 Hb_000184_070 Hb_000184_070 Hb_001789_030--Hb_000184_070 Hb_000637_150 Hb_000637_150 Hb_001789_030--Hb_000637_150 Hb_001584_140 Hb_001584_140 Hb_001789_030--Hb_001584_140 Hb_001009_320 Hb_001009_320 Hb_001789_030--Hb_001009_320 Hb_000213_010 Hb_000213_010 Hb_000048_060--Hb_000213_010 Hb_003994_280 Hb_003994_280 Hb_000048_060--Hb_003994_280 Hb_000696_050 Hb_000696_050 Hb_000048_060--Hb_000696_050 Hb_004531_120 Hb_004531_120 Hb_000048_060--Hb_004531_120 Hb_001377_270 Hb_001377_270 Hb_000048_060--Hb_001377_270 Hb_123903_010 Hb_123903_010 Hb_000048_060--Hb_123903_010 Hb_002828_020 Hb_002828_020 Hb_001500_110--Hb_002828_020 Hb_009049_020 Hb_009049_020 Hb_001500_110--Hb_009049_020 Hb_002876_320 Hb_002876_320 Hb_001500_110--Hb_002876_320 Hb_029866_100 Hb_029866_100 Hb_001500_110--Hb_029866_100 Hb_012322_020 Hb_012322_020 Hb_001500_110--Hb_012322_020 Hb_000617_100 Hb_000617_100 Hb_001500_110--Hb_000617_100 Hb_012395_170 Hb_012395_170 Hb_005276_060--Hb_012395_170 Hb_084247_010 Hb_084247_010 Hb_005276_060--Hb_084247_010 Hb_005276_060--Hb_000009_400 Hb_003617_020 Hb_003617_020 Hb_005276_060--Hb_003617_020 Hb_003929_170 Hb_003929_170 Hb_005276_060--Hb_003929_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.4313 2.95907 2.78377 7.63884 4.97311 2.97953
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.0318 3.04591 3.11367 3.65481 4.00303

CAGE analysis