Hb_000069_740

Information

Type -
Description -
Location Contig69: 756824-759000
Sequence    

Annotation

kegg
ID rcu:RCOM_1617320
description Esterase precursor, putative
nr
ID XP_002511954.1
description Esterase precursor, putative [Ricinus communis]
swissprot
ID Q9M153
description GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana GN=At4g01130 PE=2 SV=1
trembl
ID B9RE15
description Esterase, putative OS=Ricinus communis GN=RCOM_1617320 PE=4 SV=1
Gene Ontology
ID GO:0016788
description gdsl esterase lipase at4g01130

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54303: 756872-758922
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000069_740 0.0 - - Esterase precursor, putative [Ricinus communis]
2 Hb_000733_080 0.1425316827 - - PREDICTED: uncharacterized protein LOC105646960 [Jatropha curcas]
3 Hb_000445_170 0.1443404189 - - PREDICTED: probable methyltransferase PMT10 [Jatropha curcas]
4 Hb_000521_160 0.1672560952 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000004_010 0.1816311262 - - hypothetical protein Csa_6G120400 [Cucumis sativus]
6 Hb_003929_270 0.1840225152 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
7 Hb_000826_090 0.188303207 - - PREDICTED: cationic peroxidase 1-like [Populus euphratica]
8 Hb_000281_110 0.1940242684 - - PREDICTED: pumilio homolog 12 [Jatropha curcas]
9 Hb_012796_020 0.1958606709 - - PREDICTED: ADP-ribosylation factor 1 [Prunus mume]
10 Hb_000032_070 0.1959884789 - - hypothetical protein POPTR_0003s13760g [Populus trichocarpa]
11 Hb_004846_200 0.1961884054 - - PREDICTED: shikimate O-hydroxycinnamoyltransferase [Jatropha curcas]
12 Hb_004129_140 0.2018129979 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g06470 [Jatropha curcas]
13 Hb_000264_110 0.2031285811 - - PREDICTED: trafficking protein particle complex subunit 13 [Jatropha curcas]
14 Hb_005695_120 0.2054969371 - - Pollen-specific protein C13 precursor, putative [Ricinus communis]
15 Hb_000343_140 0.2056519799 - - PREDICTED: uncharacterized protein LOC105634966 [Jatropha curcas]
16 Hb_012340_050 0.2062218767 - - PREDICTED: actin-related protein 5 [Jatropha curcas]
17 Hb_000207_100 0.2065044023 - - PREDICTED: ABC transporter G family member 25 [Jatropha curcas]
18 Hb_024074_020 0.2065790043 - - PREDICTED: probable serine/threonine-protein kinase At1g09600 [Jatropha curcas]
19 Hb_002053_140 0.2075665059 - - PREDICTED: coatomer subunit epsilon-1 [Jatropha curcas]
20 Hb_006452_110 0.2082536096 - - Ubiquinol-cytochrome c reductase complex 7.8 kDa protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000069_740 Hb_000069_740 Hb_000733_080 Hb_000733_080 Hb_000069_740--Hb_000733_080 Hb_000445_170 Hb_000445_170 Hb_000069_740--Hb_000445_170 Hb_000521_160 Hb_000521_160 Hb_000069_740--Hb_000521_160 Hb_000004_010 Hb_000004_010 Hb_000069_740--Hb_000004_010 Hb_003929_270 Hb_003929_270 Hb_000069_740--Hb_003929_270 Hb_000826_090 Hb_000826_090 Hb_000069_740--Hb_000826_090 Hb_001252_210 Hb_001252_210 Hb_000733_080--Hb_001252_210 Hb_006452_110 Hb_006452_110 Hb_000733_080--Hb_006452_110 Hb_019762_020 Hb_019762_020 Hb_000733_080--Hb_019762_020 Hb_000023_290 Hb_000023_290 Hb_000733_080--Hb_000023_290 Hb_003894_080 Hb_003894_080 Hb_000733_080--Hb_003894_080 Hb_000733_080--Hb_003929_270 Hb_002228_100 Hb_002228_100 Hb_000445_170--Hb_002228_100 Hb_000137_070 Hb_000137_070 Hb_000445_170--Hb_000137_070 Hb_000445_170--Hb_000733_080 Hb_000445_170--Hb_006452_110 Hb_012340_050 Hb_012340_050 Hb_000445_170--Hb_012340_050 Hb_002518_030 Hb_002518_030 Hb_000521_160--Hb_002518_030 Hb_012796_020 Hb_012796_020 Hb_000521_160--Hb_012796_020 Hb_002298_030 Hb_002298_030 Hb_000521_160--Hb_002298_030 Hb_000521_160--Hb_003929_270 Hb_000167_080 Hb_000167_080 Hb_000521_160--Hb_000167_080 Hb_000453_160 Hb_000453_160 Hb_000521_160--Hb_000453_160 Hb_000720_080 Hb_000720_080 Hb_000004_010--Hb_000720_080 Hb_001747_030 Hb_001747_030 Hb_000004_010--Hb_001747_030 Hb_000016_060 Hb_000016_060 Hb_000004_010--Hb_000016_060 Hb_007390_020 Hb_007390_020 Hb_000004_010--Hb_007390_020 Hb_005527_020 Hb_005527_020 Hb_000004_010--Hb_005527_020 Hb_003669_010 Hb_003669_010 Hb_000004_010--Hb_003669_010 Hb_002053_140 Hb_002053_140 Hb_003929_270--Hb_002053_140 Hb_086085_020 Hb_086085_020 Hb_003929_270--Hb_086085_020 Hb_000141_080 Hb_000141_080 Hb_003929_270--Hb_000141_080 Hb_000735_110 Hb_000735_110 Hb_003929_270--Hb_000735_110 Hb_030736_020 Hb_030736_020 Hb_003929_270--Hb_030736_020 Hb_006618_120 Hb_006618_120 Hb_003929_270--Hb_006618_120 Hb_000138_170 Hb_000138_170 Hb_000826_090--Hb_000138_170 Hb_000826_090--Hb_012340_050 Hb_002411_040 Hb_002411_040 Hb_000826_090--Hb_002411_040 Hb_000826_090--Hb_019762_020 Hb_111985_110 Hb_111985_110 Hb_000826_090--Hb_111985_110 Hb_079483_020 Hb_079483_020 Hb_000826_090--Hb_079483_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.79003 0.363404 1.70248 16.8654 6.23107 3.84335
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.80732 4.43943 4.2475 1.95905 2.32932

CAGE analysis