Hb_000733_080

Information

Type -
Description -
Location Contig733: 66787-67280
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa012257mg
description hypothetical protein
nr
ID XP_012088314.1
description PREDICTED: uncharacterized protein LOC105646960 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LCA2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01358 PE=4 SV=1
Gene Ontology
ID GO:0005089
description maternal effect embryo arrest 60 isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000733_080 0.0 - - PREDICTED: uncharacterized protein LOC105646960 [Jatropha curcas]
2 Hb_001252_210 0.1156299969 - - PREDICTED: glycine cleavage system H protein 2, mitochondrial [Jatropha curcas]
3 Hb_006452_110 0.1157746896 - - Ubiquinol-cytochrome c reductase complex 7.8 kDa protein, putative [Ricinus communis]
4 Hb_019762_020 0.1222836082 - - PREDICTED: selenoprotein K-like [Nicotiana tomentosiformis]
5 Hb_000023_290 0.1273412188 - - steroid binding protein, putative [Ricinus communis]
6 Hb_003894_080 0.1280506085 - - PREDICTED: protein cornichon homolog 4 [Vitis vinifera]
7 Hb_003929_270 0.1332632407 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
8 Hb_001163_040 0.1353218401 - - Cytochrome-c oxidases,electron carriers [Theobroma cacao]
9 Hb_000521_160 0.137284265 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000340_520 0.137285079 - - PREDICTED: cytochrome c oxidase subunit 5C [Jatropha curcas]
11 Hb_004784_020 0.1393275762 - - PREDICTED: uncharacterized protein LOC105636452 [Jatropha curcas]
12 Hb_001700_030 0.1398911228 transcription factor TF Family: ULT PREDICTED: protein ULTRAPETALA 1-like [Jatropha curcas]
13 Hb_000069_740 0.1425316827 - - Esterase precursor, putative [Ricinus communis]
14 Hb_066768_010 0.1434447672 - - PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial [Jatropha curcas]
15 Hb_000215_200 0.1467887025 - - RecName: Full=Profilin-2; AltName: Full=Pollen allergen Hev b 8.0102; AltName: Allergen=Hev b 8.0102 [Hevea brasiliensis]
16 Hb_004032_030 0.1476179845 - - PREDICTED: RNA-binding protein 24-like isoform X1 [Populus euphratica]
17 Hb_000125_010 0.1479685586 transcription factor TF Family: mTERF -
18 Hb_001250_060 0.1485495486 - - PREDICTED: signal recognition particle receptor subunit beta-like [Jatropha curcas]
19 Hb_000417_100 0.150924924 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 12-like [Jatropha curcas]
20 Hb_000162_260 0.1524221743 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 [Nelumbo nucifera]

Gene co-expression network

sample Hb_000733_080 Hb_000733_080 Hb_001252_210 Hb_001252_210 Hb_000733_080--Hb_001252_210 Hb_006452_110 Hb_006452_110 Hb_000733_080--Hb_006452_110 Hb_019762_020 Hb_019762_020 Hb_000733_080--Hb_019762_020 Hb_000023_290 Hb_000023_290 Hb_000733_080--Hb_000023_290 Hb_003894_080 Hb_003894_080 Hb_000733_080--Hb_003894_080 Hb_003929_270 Hb_003929_270 Hb_000733_080--Hb_003929_270 Hb_002284_230 Hb_002284_230 Hb_001252_210--Hb_002284_230 Hb_000574_130 Hb_000574_130 Hb_001252_210--Hb_000574_130 Hb_001252_210--Hb_003894_080 Hb_000046_350 Hb_000046_350 Hb_001252_210--Hb_000046_350 Hb_001252_210--Hb_019762_020 Hb_006452_110--Hb_003894_080 Hb_000130_100 Hb_000130_100 Hb_006452_110--Hb_000130_100 Hb_005000_330 Hb_005000_330 Hb_006452_110--Hb_005000_330 Hb_012340_050 Hb_012340_050 Hb_006452_110--Hb_012340_050 Hb_001163_040 Hb_001163_040 Hb_006452_110--Hb_001163_040 Hb_002411_040 Hb_002411_040 Hb_019762_020--Hb_002411_040 Hb_026314_020 Hb_026314_020 Hb_019762_020--Hb_026314_020 Hb_017413_010 Hb_017413_010 Hb_019762_020--Hb_017413_010 Hb_003025_040 Hb_003025_040 Hb_019762_020--Hb_003025_040 Hb_005278_020 Hb_005278_020 Hb_019762_020--Hb_005278_020 Hb_004784_020 Hb_004784_020 Hb_019762_020--Hb_004784_020 Hb_002133_020 Hb_002133_020 Hb_000023_290--Hb_002133_020 Hb_000016_060 Hb_000016_060 Hb_000023_290--Hb_000016_060 Hb_004176_070 Hb_004176_070 Hb_000023_290--Hb_004176_070 Hb_000359_090 Hb_000359_090 Hb_000023_290--Hb_000359_090 Hb_001747_030 Hb_001747_030 Hb_000023_290--Hb_001747_030 Hb_000292_060 Hb_000292_060 Hb_003894_080--Hb_000292_060 Hb_000322_140 Hb_000322_140 Hb_003894_080--Hb_000322_140 Hb_000028_350 Hb_000028_350 Hb_003894_080--Hb_000028_350 Hb_003605_160 Hb_003605_160 Hb_003894_080--Hb_003605_160 Hb_002053_140 Hb_002053_140 Hb_003929_270--Hb_002053_140 Hb_086085_020 Hb_086085_020 Hb_003929_270--Hb_086085_020 Hb_000141_080 Hb_000141_080 Hb_003929_270--Hb_000141_080 Hb_000735_110 Hb_000735_110 Hb_003929_270--Hb_000735_110 Hb_030736_020 Hb_030736_020 Hb_003929_270--Hb_030736_020 Hb_006618_120 Hb_006618_120 Hb_003929_270--Hb_006618_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.9408 5.74194 11.087 95.6966 21.9216 35.8043
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
54.6315 44.3569 38.8809 18.7062 18.128

CAGE analysis