Hb_156850_060

Information

Type -
Description -
Location Contig156850: 43099-43371
Sequence    

Annotation

kegg
ID rcu:RCOM_1600690
description hypothetical protein
nr
ID XP_012073674.1
description PREDICTED: uncharacterized protein LOC105635248 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KPA9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08119 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156850_060 0.0 - - PREDICTED: uncharacterized protein LOC105635248 [Jatropha curcas]
2 Hb_000371_070 0.2425447236 - - PREDICTED: uncharacterized protein LOC103863319 [Brassica rapa]
3 Hb_009974_020 0.2604749152 - - PREDICTED: uncharacterized protein LOC104427753 [Eucalyptus grandis]
4 Hb_001632_030 0.2885489682 - - PREDICTED: chaperone protein ClpB1 [Jatropha curcas]
5 Hb_008066_030 0.2894568865 - - PREDICTED: uncharacterized protein LOC105631333 [Jatropha curcas]
6 Hb_001348_200 0.2952790432 - - -
7 Hb_004129_160 0.2972894404 - - small heat-shock protein, putative [Ricinus communis]
8 Hb_054865_070 0.2988044657 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
9 Hb_001141_110 0.3011029485 - - hypothetical protein JCGZ_02206 [Jatropha curcas]
10 Hb_000152_100 0.3081919935 - - PREDICTED: probable protein phosphatase 2C 75 isoform X2 [Jatropha curcas]
11 Hb_000329_550 0.3084027524 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 8 [Jatropha curcas]
12 Hb_004679_060 0.3110640603 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001433_100 0.3122894203 - - PREDICTED: F-box/LRR-repeat protein 3 isoform X1 [Jatropha curcas]
14 Hb_098533_020 0.3162994283 - - PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Jatropha curcas]
15 Hb_012163_030 0.3171412336 - - PREDICTED: uncharacterized protein LOC105647861 [Jatropha curcas]
16 Hb_000749_080 0.3183555041 - - Alpha-expansin 12 precursor, putative [Ricinus communis]
17 Hb_000300_210 0.3198876975 - - gd2b, putative [Ricinus communis]
18 Hb_000130_450 0.3218841362 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002526_020 0.3243780241 - - -
20 Hb_000258_180 0.3257119944 - - PREDICTED: glutathione S-transferase U10-like [Vitis vinifera]

Gene co-expression network

sample Hb_156850_060 Hb_156850_060 Hb_000371_070 Hb_000371_070 Hb_156850_060--Hb_000371_070 Hb_009974_020 Hb_009974_020 Hb_156850_060--Hb_009974_020 Hb_001632_030 Hb_001632_030 Hb_156850_060--Hb_001632_030 Hb_008066_030 Hb_008066_030 Hb_156850_060--Hb_008066_030 Hb_001348_200 Hb_001348_200 Hb_156850_060--Hb_001348_200 Hb_004129_160 Hb_004129_160 Hb_156850_060--Hb_004129_160 Hb_001433_100 Hb_001433_100 Hb_000371_070--Hb_001433_100 Hb_000371_070--Hb_008066_030 Hb_003060_040 Hb_003060_040 Hb_000371_070--Hb_003060_040 Hb_001579_140 Hb_001579_140 Hb_000371_070--Hb_001579_140 Hb_034482_040 Hb_034482_040 Hb_000371_070--Hb_034482_040 Hb_001951_250 Hb_001951_250 Hb_000371_070--Hb_001951_250 Hb_003777_360 Hb_003777_360 Hb_009974_020--Hb_003777_360 Hb_000117_100 Hb_000117_100 Hb_009974_020--Hb_000117_100 Hb_140049_010 Hb_140049_010 Hb_009974_020--Hb_140049_010 Hb_001141_110 Hb_001141_110 Hb_009974_020--Hb_001141_110 Hb_007558_020 Hb_007558_020 Hb_009974_020--Hb_007558_020 Hb_001488_370 Hb_001488_370 Hb_009974_020--Hb_001488_370 Hb_000613_150 Hb_000613_150 Hb_001632_030--Hb_000613_150 Hb_012163_030 Hb_012163_030 Hb_001632_030--Hb_012163_030 Hb_185224_010 Hb_185224_010 Hb_001632_030--Hb_185224_010 Hb_003124_180 Hb_003124_180 Hb_001632_030--Hb_003124_180 Hb_026740_010 Hb_026740_010 Hb_001632_030--Hb_026740_010 Hb_000317_530 Hb_000317_530 Hb_001632_030--Hb_000317_530 Hb_000979_250 Hb_000979_250 Hb_008066_030--Hb_000979_250 Hb_003198_010 Hb_003198_010 Hb_008066_030--Hb_003198_010 Hb_004567_020 Hb_004567_020 Hb_008066_030--Hb_004567_020 Hb_008066_030--Hb_001433_100 Hb_000792_120 Hb_000792_120 Hb_008066_030--Hb_000792_120 Hb_000300_210 Hb_000300_210 Hb_008066_030--Hb_000300_210 Hb_001348_200--Hb_012163_030 Hb_001998_060 Hb_001998_060 Hb_001348_200--Hb_001998_060 Hb_160366_010 Hb_160366_010 Hb_001348_200--Hb_160366_010 Hb_000123_200 Hb_000123_200 Hb_001348_200--Hb_000123_200 Hb_039112_010 Hb_039112_010 Hb_001348_200--Hb_039112_010 Hb_000869_110 Hb_000869_110 Hb_001348_200--Hb_000869_110 Hb_004129_160--Hb_001141_110 Hb_004679_060 Hb_004679_060 Hb_004129_160--Hb_004679_060 Hb_005656_190 Hb_005656_190 Hb_004129_160--Hb_005656_190 Hb_147752_010 Hb_147752_010 Hb_004129_160--Hb_147752_010 Hb_170426_010 Hb_170426_010 Hb_004129_160--Hb_170426_010 Hb_000045_210 Hb_000045_210 Hb_004129_160--Hb_000045_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.652417 2.64501 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.4065 6.84425 1.02488 0.355082 0

CAGE analysis